Laboratory of timing, oscillations and patterns at EPFL

Lausanne, Switzerland
Joined March 2019
Excited to build on the footsteps of hugely #interdisciplinary mentors @StephanGrill @mpicbg @oateslab @epflsv as I make the transition to @TIFRScience as a group leader in September. 1/n tifr.res.in/~dbs/faculty.htm… symmetrylab.squarespace.com
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We are looking for a motivated colleague (Ph.D. or Postdoc) to work on an exciting project focusing on Zebrafish muscle development together with the @OatesLab ! Applications to [email protected] Please share with interested people & RT #live #imaging #microscopy @EPFL_en
👨‍🔬 Andy Oates is a developmental biologist who teaches @EPFL. He studies spinal column development in zebrafish 🐟 In this short video, he explains the purpose of his research in a nutshell. Watch the entire episode to find out more: youtu.be/JxiaFzlRHx8 @epflSV @EPFL_en
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Our featured article: Towards a physical understanding of developmental patterning go.nature.com/3o2hLzg #Review by @JoseNegreteJr3 & @OatesLab @EPFL
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“Being in a technical school gives us many opportunities”. Watch our interview with the new dean of the School of Life Sciences, Andy Oates @OatesLab actu.epfl.ch/news/being-in-a…
The new Webinar series of #LS2Microscopy will start today. You will find the zoom link here: meetings.ls2.ch/microscopy-w… @LS2Switzerland
@LS2Switzerland Microscopy Webinar Kick off session by Arianne Bercowsky Rama (@OatesLab, EPFL, Switzerland) - May 25th 17:00 CEST - link will follow
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@LS2Switzerland Microscopy Webinar Kick off session by Arianne Bercowsky Rama (@OatesLab, EPFL, Switzerland) - May 25th 17:00 CEST - link will follow
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Hello World: Guess what? EPFL Institute of Bioengineering goes social media today! Some will rant: 'bout time! And they do have a case, no question. But as goes the saying: better late than never! Cheers 🙂
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Want to actively shape your career? Plan to stay in academia? Or considering a non-academic career path? Excited to share a few tips on career development for #ECR Great collaboration with @HurleyPhD @SSarabipour @AdrianaBankston #ECRchat ecrlife.org/early-career-res…
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Our latest work between @OatesLab and MPIPKS Dresden. Oscillatory gene expression in living systems is non-stationary. It might be controlled by controlled external by transcription factors that fluctuate over timr or that are active transiently.
Theory of genetic oscillations with external noisy regulation biorxiv.org/cgi/content/shor… #biorxiv_biophys
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New back-to-back releases of our DL python packages csbdeep and stardist. Among many other things, now allows for using tf2, stitched predictions on large 2D images, and importing 3D stardist results in @blender_org :) kudos to @uschmidt83!
New Python releases for #CSBDeep and #StarDist! Lots of improvements under the hood, including support for TensorFlow 2. Joint effort with @martweig! All changes: github.com/CSBDeep/CSBDeep/r… github.com/mpicbg-csbd/stard…
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¡Hola! ¿Quieren jugar un rato? 😊 Les dejamos este video para que nos respondan ¿de qué se trata este modelo físico? Respondan, pregunten a sus seguidorxs o simplemente vean qué hipnótico es 👀 ¡Mañana les contamos todo! #cienciaargentina #ibioba #fisica #relojbiologico
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I am very excited to announce that I have been appointed as an Associate Professor at the Université de Lausanne @UNIL in Switzerland. This means the Vastenhouw lab will be moving to #Lausanne, the most beautiful city in the world (according to the @Independent, and pic) 1/4
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Interested in doing a PhD at the intersection of machine learning, biological image analysis, and computational microscopy? Then join my group @epfl in beautiful Lausanne, Switzerland - 1 week left to apply! epfl.ch/education/phd/progra… Please RT
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call for modellers to assist in understanding pandemic dynamics
Modellers - @royalsociety is coordinating an initiative to provide rapid assistance in modelling the pandemic (RAMP) for thoseworking beyond the usual communities. See if you can help epcced.github.io/ramp/
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1) You have data to analyze? Retweet this! 😊 2) You don’t? Retweet this! (Your network might!!!! 🙏 3) You want to help? Sign up on our forum at discourse.data-against-covid…
If you're a life scientist (or you're friends with one), telling us about your data science problems is now easier than ever. Fill in this form and we'll be right with you. forms.gle/zvfvifn8JvP4aYLY9 🧑‍💻🧡🧑‍🔬
Imaging oscillating reporter gene expression to study pattern formation in #zebrafish #segmentation. Acquired by @DSoroldoni at the ACQUIFER Imaging Machine. Thanks to @OatesLab for this beauty! #fluorescencefriday.
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Hi! I am a bot that retweet your tweets containing the hashtag #BioImageAnalysis I am alive thanks to @StatnMap & @MarionLouveaux A blog article explains how I was born: statnmap.com/2019-08-30-crea… {tweetrbot} 📦 is my core: github.com/statnmap/tweetrbo…. Feel free to follow me! 🤖
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The power of technology💪🏼
Day 2 of #neubiasBordeaux #TS15 continues with a practical session on Python 🐍 and plotting 📊📈📉 by @bercowskya teaching remotely from Switzerland🇨🇭via Skype.
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First edition of the #Image Analysis Breakfasts at @EPFL_en today! A team of enthusiastic image-analysis experts (all volunteers 😊) discuss and suggest solutions to other EPFL fellows faced with some imaging problems. #ImagingCommunity Next edition: March 16, 2020
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