@BioComputeObj

BioCompute is a community effort to standardize bioinformatic workflows, predominantly in #NGS.

 Washington, DC
biocomputeobject.org/
Joined May 2018
  • Tweets73
  • Following49
  • Followers90
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We would like to share some great news! Drs. Mazumder and Kahsay have received an NIH R24 award for a study that will enhance the capability of GlyGen as a central resource for glycans and glycoconjugates and serve the biomedical research community. Congratulations Raja and Robel
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Hi! If you know anyone who is relatively new to bash scripting in bioinformatics, particularly if they want to use the advanced features of ⁦@dnanexus⁩ or #ukbrap, please point them to this site by my colleague ⁦@tladeras⁩ : laderast.github.io/bash_for_…
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BioCompute retweeted
Sergei Pond@sergeilkp6 Oct 2022
Maybe someone/something has already done? Is there a list which matches GenBank SARS-CoV-2 consensus genomes with underlying SRA NGS files? Asking for a friend here.
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Tools from @SevenBridges @dnanexus and @galaxyproject will be featured! #BioCompute #BioComputeObjects
BioCompute@BioComputeObj18 Aug 2022
A new BioCompute workshop will be held on September 13th via WebEx! Learn how to create BCO records from your #workflows directly on popular #bioinformatics platforms, and how to deposit them into an access-controlled database. Please register here: eventbrite.com/e/building-bi…
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Interested in bioinformatics, knowledgebases and algorithm development? Come work with us in DC (remote work also possible) gwu.jobs/postings/90020
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BioCompute retweeted
GW SMHS@GWSMHS15 Nov 2021
A consortium led by @GW_HIVE_Lab, @rmazumde, and @Embleema, with @TempleUniv, has received @FDA funding to advance the work against #infectiousdiseases. Read more: bit.ly/3FaDCvY via @TheVDT
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BioCompute retweeted
Ben Busby!@DCGenomics3 Nov 2021
Hi folks! If you know anyone who does or is interested in computational biology related to dementia, please send this to them or simply retweet. Thanks! demondementia.com/neurohack2…
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BioCompute retweeted
nature
@Nature2 Nov 2021
Antibodies and other reagents for glycans have lagged behind those for proteins and nucleic acids, but the field is catching up go.nature.com/3w72qBq
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BioCompute retweeted
atin basu
@atinecon22 Oct 2021
#gametheory can model humans using heuristics to guide behavior instead of assuming humans are hyper-rational. #realworld #econtwitter. #machinelearning can validate these models. mdpi-res.com/d_attachment/ga…
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I'm speaking at GCC2021. Same talk for 2 different timezones gcc2021.sched.com/event/69b0… gcc2021.sched.com/event/ec89… "Publication of @BioComputeObj (@IEEEorg -2791-2020) created from @galaxyproject workflow invocations" #BioCompute #UseGalaxy @sched
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Applications for GCC2021 fellowships programs also close Monday, May 17: 1. James Taylor Fellowships - galaxyproject.org/news/2021-… - Open to students & post-docs 2. Community Fund Fellowships - galaxyproject.org/news/2021-… - Open to researchers in developing economies #UseGalaxy
Galaxy Fellowships logo

ALT Galaxy Fellowships logo

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The Galaxy community is pleased to announce a new webinar series: Galaxy Resources. In the first one (April 14), Dave Clements (@tnabtaf) will guide us through all the resources useful for *Researchers* 🔬 Interested? Sign up and join! galaxyproject.org/events/202…
Galaxy Resources For... Researchers, Dave Clements, 10 am EDT, 4 pm CEST, April 14

ALT Galaxy Resources For... Researchers, Dave Clements, 10 am EDT, 4 pm CEST, April 14

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BioCompute retweeted
GlyGen@gly_gen8 Apr 2021
We hope you enjoyed the @gly_gen demo of the Super Search, protein Site Search, and GlyGen Mapper's glycan ID mapping functionality by @rmazumde. View recording of the demo at youtu.be/Xw9AECStmQI. #glygen demo Q&A wiki.glygen.org/index.php/De…, glygen.org, @flyglyco.
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Register for a 30-minute demo to show new mapping and search tools in @gly_gen and how to explore glycosylation sites and cancer mutations. Use link to register eventbrite.com/e/glygen-demo… @GWSMHS @GW_IBS @GWCancer

GlyGen Demo: New search tools and exploration of glycosylation sites

New search tools in GlyGen and their application in the exploration of glycosylation sites

eventbrite.com
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github.com/HadleyKing/bco-to… Just released: a new set of command line tools for manipulating #BioComputeObjects 🥳🎉 Contributions are encouraged via pull request and issue submission #BioCompute
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RE: @WSJ opinion published exactly 2 days after I was confirmed to finish all requirements for my PhD - ME: ... 🤨🧐😤🤦‍♀️ MATT: That's what I need to do, get an honorary doctorate. Then I can be a doctor, too! ME: ... I hate you. #HeJokes #CallHerWhatSheWantsToBeCalled #DrBiden
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1 week left to register for Galaxy Admin Training! Join and abduct all of our administration knowledge and experience for your own server 👽🛸 galaxyproject.org/events/202… #UseGalaxy #Training #Admin
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Communicating Regulatory High Throughput Sequencing Data Using BioCompute Objects biorxiv.org/cgi/content/shor… #bioRxiv
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Call starting right now.
Galaxy Australia@GalaxyAustralia18 Nov 2020
2nd call for the #UseGalaxy Paper Cuts starts in 10 minutes: galaxyproject.org/events/202… Help make Galaxy an easy experience from start to finish #UseGalaxy
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Read on to learn more about the @BioComputeObj standard for communicating #DataAnalysis pipelines
bioRxiv@biorxivpreprint5 Nov 2020
Strengthening the BioCompute Standard by Crowdsourcing on PrecisionFDA biorxiv.org/cgi/content/shor… #bioRxiv
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