scikit-bio (@scikitbio) header
scikit-bio (@scikitbio) profile picture

scikit-bio

@scikitbio
scikit-bio.org
Joined April 2015
  • Tweets51
  • Following0
  • Followers199
2Media
Photo by scikit-bio (@scikitbio)Photo by scikit-bio (@scikitbio)
scikit-bio retweeted
Qiyun Zhu (@zhuqiyun) profile picture
Qiyun Zhu
@zhuqiyun11 Dec 2025
The scikit-bio paper in online in Nature Methods! Many thanks to our collaborators, community contributors and reviewers! We couldn’t have done it without you. nature.com/articles/s41592-0… #Bioinformatics #OpenSource

Scikit-bio: a fundamental Python library for biological omic data analysis

Nature Methods - Scikit-bio: a fundamental Python library for biological omic data analysis

nature.com
4
56
1
292
54,389
scikit-bio retweeted
QIIME 2 (@qiime2) profile picture
QIIME 2@qiime29 Feb 2017
#QIIME2 2017.2 is live! Improved DADA2 perf., expanded docs, and new interactive viz! #microbiome #bioinformatics forum.qiime2.org/t/qiime-2-2…

QIIME 2 2017.2 release is now live!

Hi all, The QIIME 2 2017.2 release is now live! You can find the full release notes here, but here are a few of the highlights: Support for paired end read analysis. Parallel processing support and...

forum.qiime2.org
21
33
scikit-bio retweeted
QIIME 2 (@qiime2) profile picture
QIIME 2@qiime27 Nov 2016
#qiime 2.0.6 is live, new tutorials and forum! spring 2017 workshop announcement soon. #microbiome #bioinformatics github.com/qiime2/qiime2/rel…
Release qiime 2.0.6: data provenance, simplified viewing, and new forum · rachis-org/rachis

Release qiime 2.0.6: data provenance, simplified viewing, and new forum · rachis-org/rachis

We're excited to announce the 2.0.6 minor release of the QIIME 2 framework and supporting plugins. This is the second synchronized release, meaning that we intend all interfaces and plugins ver...

github.com
27
3
27
With greater accessibility of #machinelearning, we can experiment with more uses in #marketing. @scikitbio hbr.org/2016/10/machine-lear…
Machine Learning Is No Longer Just for Experts

Machine Learning Is No Longer Just for Experts

You don’t need a PhD, and that’s a big deal.

hbr.org
1
2
scikit-bio retweeted
QIIME 2 (@qiime2) profile picture
QIIME 2@qiime214 Apr 2016
it's official: QIIME 2 is @NSF funded! nsf.gov/awardsearch/showAwar…
1
20
19
TIL:pip does not install sdist ending in `-pyX.Y` except on matching Python version: github.com/pypa/pip/issues/3… . Drop Python 2 safely !
Install compatible packages with the Python version being used · Issue #3182 · pypa/pip

Install compatible packages with the Python version being used · Issue #3182 · pypa/pip

(sorry if this issue has been raised before) Recently coverage dropped Python 3.2 support and several PRs of many different projects started failing on travis. Just to make it clear: the PRs were o...

github.com
2
scikit-bio turned out to be more handy than I thought. scikit-bio.org/
3
2
scikit-bio retweeted
Peter Cock (@pjacock) profile picture
Peter Cock@pjacock10 Dec 2015
Replying to @hainm_comp
@hainm_comp: On @Biopython & @scikitbio, see eg xitter.cf/pjacock/status/5980629… and xitter.cf/gregcaporaso/status/59…
You’re unable to view this Post because this account owner limits who can view their Posts. Learn more
1
1
Replying to @RipLegacyPython
@RipLegacyPython, you may be interested in @scikitbio 002 RFC github.com/biocore/scikit-bi…
2
Congratulations to @gregcaporaso and @jairideout on their @thePeerJ top #microbiome article on open ref OTUs! peerj.com/articles/545/
8
7
How does #scikit-bio get developed? youtube.com/watch?v=nRorModi… @gregcaporaso
4
6
New upload: Accepted python-skbio 0.4.0-1 (source amd64) into unstable, unstable by Andreas Tille... deb.li/3a9UE
3
1
scikit-bio retweeted
Han Fang (@Han_Fang_) profile picture
Han Fang
@Han_Fang_7 Aug 2015
Replying to @scikitbio
@scikitbio from @gregcaporaso's lab looks amazing! See their talk at #scipy2015 youtube.com/watch?v=ZpgkRQoo…
Scikit bio: A Bioinformatics Library for Data Scientists, Students, and Developers | SciPy 2015 | J

Scikit bio: A Bioinformatics Library for Data Scientists, Students, and Developers | SciPy 2015 | J

Enjoy the videos and music you love, upload original content, and share it all with friends, family, and the world on YouTube.

youtube.com
1
3
3
What I see in my head when I hear @gregcaporaso say that scikit bio is build on top on pandas (1/2)
Image from its my voice in a box 🎤 (@subunitA)
4
5
Load more