@qiime2

Announcements, tech support, community & discussion can always be found on the QIIME 2 Forum (https://xitter.cf/t.co/U2iHan1zR9).

forum.qiime2.org/c/announcements
Joined October 2015
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Happy Monday! Start your week w/ a new QIIME 2 release: @qiime2 2024.2. New parallel shotgun actions, an updated visualizer for summarizing feature tables (see `summarize-plus`), performance enhancements & minor fixes throughout & a lot more. Enjoy! forum.qiime2.org/t/qiime-2-2…

QIIME 2 2024.2 is now available!

The QIIME 2 2024.2 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: 🎉 As a reminder, our next planned QIIME 2 release is scheduled for May 2023 (QIIME 2...

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We're discussing whether it's important to continue posting links to our release announcements on X/Twitter. Is X/Twitter the primary way that you learn about new #QIIME2 releases?
76%Yes
24%No
201 votes • Final results
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#QIIME2 2023.9 is now available! 🎊 Exciting updates include an alpha release of our shotgun #metagenomics distribution (🎉🎉🎉), fully integrated provenance replay within the framework, batched decontam analysis, and more! Thank you contributors!! 🙌 forum.qiime2.org/t/qiime-2-2…

QIIME 2 2023.9 is now available!

The QIIME 2 2023.9 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: 🎉 As a reminder, our next planned QIIME 2 release is scheduled for December 2023...

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QIIME 2 2023.7 is now available and includes a new 'split' method in q2-feature-table, support for OutputCollections in Galaxy, a whole new packaging distribution system, various minor bug fixes, and much more! Thanks to all who contributed! 🙌 forum.qiime2.org/t/qiime-2-2…

QIIME 2 2023.7 is now available!

The QIIME 2 2023.7 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: 🎉 As a reminder, our next planned QIIME 2 release is scheduled for September 2023...

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@QIIME2 2023.5 is now available & includes new parallel computing support w @ParslProject, ability to resume failed pipeline runs, provenance replay, decontam actions, and much more. Thank you to all who contributed! #microbiome #bioinformatics forum.qiime2.org/t/qiime-2-2…

QIIME 2 2023.5 is now available!

The QIIME 2 2023.5 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: 🎉 As a reminder, our next planned QIIME 2 release is scheduled for August 2023 (QIIME...

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We are very excited to make the @qiime2 toolkit for microbiome bioinformatics available on our cancer @galaxyproject server! This integration provides a graphical user interface for all QIIME2 tools plus connections b/t QIIME2 tools and the thousands of other tools in Galaxy
QIIME 2@qiime224 Apr 2023
We're very excited to share that @qiime2 is now available on the public @galaxyproject server, cancer.usegalaxy.org, providing an easily accessible graphical interface for #microbiome #bioinformatics. More details at forum.qiime2.org/t/qiime-2-a…
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We're very excited to share that @qiime2 is now available on the public @galaxyproject server, cancer.usegalaxy.org, providing an easily accessible graphical interface for #microbiome #bioinformatics. More details at forum.qiime2.org/t/qiime-2-a…
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#QIIME 2 2023.2 is now live! Notable features include a diverging barplot visualizer for #ANCOM-BC results, a Proportional Engraftment of Donor Strains method and visualizer in q2-fmt, and misc bug fixes and improvements. Thanks to all contributors! forum.qiime2.org/t/qiime-2-2…

QIIME 2 2023.2 is now available!

The QIIME 2 2023.2 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: 🎉 As a reminder, our next planned QIIME 2 release is scheduled for May 2023 (QIIME 2...

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Multi-amplicon microbiome data analysis pipelines for mixed orientation sequences using QIIME2: Assessing reference database, variable region and preprocessing bias in classification of mock bacterial community samples #Metagenomic #MicrobimeData @PLOSONE dx.plos.org/10.1371/journal.…
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@QIIME2 2022.11 is live! Big new features inc artifact cache, improved diff abundance testing w ANCOM-BC, new usage examples, & more... Thanks to all contributors! Many exciting new #microbiome #bioinformatics features coming in 2023 - see you then! forum.qiime2.org/t/qiime-2-2…

QIIME 2 2022.11 is now available!

The QIIME 2 2022.11 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: 🎉 As a reminder, our next planned QIIME 2 release is scheduled for February 2023...

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QIIME 2 retweeted
Jake@jjminich17 Nov 2022
Great collab @salkinstitute @Scripps_Ocean @KnightLabNews @GenomesLab @HaererAndreas @oysteroasis @mcdonadt @zackskel @Frable UG Joe Vechinski, Mike Shane, Antonio Gonzalez, Dani Perry, and Eric Allen…from the deep sea to the surf zone !! New @qiime2 plug-in! Katharoseq
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QIIME 2 retweeted
ISB@isbsci12 Oct 2022
Today's the day. The 2022 ISB Virtual Microbiome Series (#isbmicro22) begins in 90 minutes. Day 1 of our course features @thaasophobia walking through analyzing amplicon sequencing data with Qiime 2. You still have time to register! Join us! @gibbological isbscience.org/microbiome202…

2022 ISB Virtual Microbiome Series

On October 12 - 14, 2022, ISB will host a virtual course and symposium on global perspectives in microbiome research.

isbscience.org
ISB@isbsci11 Oct 2022
1000+ have registered! The 3-day ISB Virtual Microbiome Series starts TOMORROW & is FREE. This event perfect for grad students, postdocs, PIs, industry scientists, educators, clinicians, & anyone who is microbiome curious. Tell your friends! #isbmicro22 isbscience.org/microbiome202…

2022 ISB Virtual Microbiome Series

On October 12 - 14, 2022, ISB will host a virtual course and symposium on global perspectives in microbiome research.

isbscience.org
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q2-sapienns, a @qiime2 plugin for loading gene family, pathway, or taxonomy tables generated with #HUMAnN3 or #MetaPhlAn3 in #QIIME2 for downstream analysis, is now available #microbiome #bioinformatics forum.qiime2.org/t/q2-sapien…

q2-sapienns: a plugin for loading HUMAnN3 and MetaPhlAn3 tables for downstream analysis in QIIME 2

Hi all, I have recently been doing some analysis of shotgun metagenomics data and wanted to run some downstream QIIME 2 analyses, including supervised classification and ordination, on tables that I...

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The Caporaso Lab is hiring a Research Scientist. Come work on cutting edge #microbiome projects focused on #cancer, environmental #sustainability and more with the core @qiime2 development team! forum.qiime2.org/t/research-…

Research Scientist position at Northern Arizona University

Hi all, The Caporaso Lab at Northern Arizona University is looking to hire a Research Scientist. This individual will contribute to microbiome data analysis, writing, outreach and advising projects...

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We have finished uploading our @galaxyproject tools to the Toolshed for QIIME 2 2022.8! More info can be found here: forum.qiime2.org/t/qiime-2-2…

QIIME 2 2022.8 is now available!

We have finished uploading our tools to the Galaxy Toolshed! You can install the core distribution by searching for suite_qiime2_core, or you can install each plugin suite individually. It is also...

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