@iMetaScience

A Wiley partner journal aims to promote metagenomics and bioinformatics by publishing research articles, reproducible methods, protocols, and reviews.

 Groningen, the Netherlands
onlinelibrary.wiley.com/journal/2770596x/
Joined December 2021
  • Tweets1.8K
  • Following907
  • Followers3K
614Media
iMeta retweeted
iMeta@iMetaScienceSep 23
🔥The iMeta Conference 2026 has come to a successful close!!!🥳 Researchers from diverse fields gathered to discuss the latest advances in information science, meta-omics, and life sciences, sparking new ideas and fostering interdisciplinary collaboration. #iMeta #LifeScience
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IOMJ Editor Shifu Chen updates fastp in iMeta for faster and better processing of FASTQ data.
iMeta@iMetaScience15 Sep 2025
🚀 #fastp: ultra-fast, full-featured & user-friendly #FASTQ preprocessing tool! ☁️ Cloud-friendly, minimal resources, web-based reports 📊 v1.0 brings enhanced HTML reporting & parallel batch processing ⚡ Power + efficiency + simplicity, all in one. onlinelibrary.wiley.com/doi/… #Bioinformatics #NGS #sequencing
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Launching the IUCN Microbial ConservationSpecialist Group as a global safeguard for microbial biodiversity. @NatureMicrobiol nature.com/articles/s41564-0…
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LexicMap paper is out!🎉 BTW, we've just released v0.8.0, with reduced indexing and searching memory usage, more features (e.g., limiting search by TaxId), and more utilities to improve the usability. github.com/shenwei356/LexicM…

Release LexicMap v0.8.0 · shenwei356/LexicMap

v0.8.0 - 2025-09-10 No changes to the index format (see Index format changelog). New commands: lexicmap utils merge-search-results: Merge a query's search results from multiple indexes. lexic...

github.com
Nature Biotechnology
@NatureBiotech10 Sep 2025
Efficient sequence alignment against millions of prokaryotic genomes with LexicMap go.nature.com/3K09TgJ
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Computational Tools and Resources for Long-read Metagenomic Sequencing Using Nanopore and PacBio academic.oup.com/gpb/article…
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Droplet microfluidics–based detection of rare antibiotic-resistant subpopulations in Escherichia coli from bloodstream infections | Science Advances science.org/doi/10.1126/scia…

Droplet microfluidics–based detection of rare antibiotic-resistant subpopulations in Escherichia...

Droplet microfluidic platform detects antibiotic resistant cells at a frequency as low as 10−6 in E. coli bloodstream infections.

science.org
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Celebrating World Microbiome Day 2025 by Wiley's flagship Multidisciplinary OA journal Advanced Science @AdvPortfolio + our Top-ranking OA Microbiology journal iMeta @iMetaScience 🙌
Wiley in research
@wileyinresearch26 Jun 2025
🌍 To mark #WorldMicrobiomeDay, Advanced Science and iMeta highlight the latest in microbiome research. From engineered models to microbial therapeutics, this research highlights cutting-edge advances in health, biotech, and medicine. Explore: ow.ly/hvz050Wh15Y
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To celebrate the #WorldMicrobiomeDay 2025, @AdvPortfolio x @iMetaScience present a collection that illuminate the dynamic roles of microbiomes across health, disease, and biotechnology: advanced.onlinelibrary.wiley…

World Microbiome Day 2025: Advanced Science

Click on the title to browse this issue

advanced.onlinelibrary.wiley.com
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Very pleased to have attended the #ChinaGut2025 Conference (>8,000 participants) by the magnificent Dongqian Lake in Ningbo and shared my recent progress on the microbial risks of plastic pollution in the iMeta session. #PlasticPollution #Plastisphere #Microbiome @iMetaScience
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Humbled to share our latest work from MOMMY 三歲定八十 in #CHINAGUT2025 (中国肠道大会) in Ningbo - largest gut health summit #MOMMY #EarlyLifeMicrobiome @CUHKMedicine @magic_limited @Siew_C_Ng @FrancisKLChan
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Online Now: The pan-cancer proteome atlas, a mass spectrometry-based landscape for discovering tumor biology, biomarkers, and therapeutic targets dlvr.it/TL3d9s
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Pseudomonas aeruginosa: ecology, evolution, pathogenesis and antimicrobial susceptibility | Nature Reviews Microbiology nature.com/articles/s41579-0…

Pseudomonas aeruginosa: ecology, evolution, pathogenesis and antimicrobial susceptibility

Nature Reviews Microbiology - Pseudomonas aeruginosa is a functionally versatile bacterium, a leading opportunistic human pathogen and a model organism in microbiology. In this Review, Letizia,...

nature.com
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Out now in Cell! Congrats Sergio and all co-authors, especially @nsegata for the fruitful collaboration. @GroMicrobiome @umcg @UMCGgenetica
Sergio Andreu-Sánchez@sea_andreu30 Apr 2025
Thrilled to share that our manuscript on strain-level gut microbiome variation across diverse populations and human phenotypes is out today in @CellCellPress! sciencedirect.com/science/ar… Curious about how strain diversity relates to human traits? Follow this thread! 🌍 (1/n)
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Deciphering the key stressors shaping the relative success of core mixoplankton across spatiotemporal scales academic.oup.com/ismecommun/… ✌️😀

Deciphering the key stressors shaping the relative success of core mixoplankton across spatiotemp...

Abstract. Deciphering the spatiotemporal dynamics and relative competitive advantages of trophic functional traits under multiple stressors has been a long

academic.oup.com
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This is how you can split a plot into multiple subplots using #tidyplots 🚀 #rstats #dataviz #phd
library(tidyplots) gene_expression |> head(n = 180) |> tidyplot(x = group, y = expression, color = group) |> add_mean_bar(alpha = 0.3) |> add_sem_errorbar() |> add_data_points_beeswarm() |> split_plot(by = external_gene_name, ncol = 3, nrow = 3)

ALT library(tidyplots) gene_expression |> head(n = 180) |> tidyplot(x = group, y = expression, color = group) |> add_mean_bar(alpha = 0.3) |> add_sem_errorbar() |> add_data_points_beeswarm() |> split_plot(by = external_gene_name, ncol = 3, nrow = 3)

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iMeta retweeted
huyifei@afeiii6 Apr 2025
iMeta | School heavy metal exposure on children's gut microbiota youtu.be/9gGcXp1-JoY?si=vV5C… via @YouTube
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Our newly published paper: Bacterial rrn copy numbers linked to soil function and crop yield in l... sciencedirect.com/science/ar…
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The #tidyplots paper is now published in @iMetaScience 🎉🥳🔥 Whenever you use tidyplots in your published work, consider citing doi.org/10.1002/imt2.70018 🙏 #rstats #dataviz #phd
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Shotgun #metagenomics has become a pivotal technology in microbiome research, enabling in-depth analysis of microbial communities at high-resolution taxonomic and functional levels. Discover more #OpenAccess in @iMetaScience⬇️ ow.ly/5YuM50VgUPY
Open access, read it now

ALT Open access, read it now

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The team of Professors Mark M. Davis and Michael P. Snyder from the Stanford University School of Medicine published a Perspective：Embracing Interpersonal Variability of Microbiome in Precision Medicine #Phenomics #Microbiome doi.org/10.1007/s43657-024-0…
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