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Analyzing whole genome DNA methylation data? Our new method MethyLasso is out in NAR! It can help you identify regions with low or partial methylation (LMR, UMR, DMV, PMD, PMD) or differentially methylated regions (DMR) and was benchmarked against others
doi.org/10.1093/nar/gkae880
Anaïs Bardet retweeted
#ResultatScientifique🔎 | MethyLasso : un nouvel outil pour analyser les données de méthylation de l’ADN
🤝 @CNRS @CNRS_Alsace @IGBMC @INSERM
✍️ Anais Bardet
📕 @NAR_Open | buff.ly/3ZrrnrQ
buff.ly/4eUnNuH
Happy to share that I will now have my own group at @IGBMC working on computational regulatory genomics!
Happy to have contributed to this beautiful work from @evgenykvon lab!
How do enhancers work over distances that sometimes exceed megabases? Excited to share our work led by @gracecbower where we uncover a unique sequence signature globally associated with long-range enhancer-promoter interactions in developing limb buds: biorxiv.org/content/10.1101/… 1/
Anaïs Bardet retweeted
Summer School on Chromatin Biology is back in August at @HelmholtzMunich. Start your journey into state-of-the-art chromatin biology with #epigenetics experts @robert_ife @metorrespadilla and Aloys Schepers – apply by April 5 for the 2024 student cohort. bit.ly/42b8tFc
Anaïs Bardet retweeted
Looking for a postdoc to join my team @institutpasteur @CNRS @InstitutPrairie. The candidate will develop machine learning methods for single-cell omics data. Project funded by the #ERCStG MULTI-viewCELL
Anaïs Bardet retweeted
Next week !
#SaveTheDate
🗓️23rd February
📍Institut Jacques Monod
Invited by the Gazave Lab (@stemdevevo), Anaïs Bardet (@a_bardet) will present the IJM seminar "Transcription factor sensitivity to DNA methylation"
➡️urlz.fr/pnoN
Anaïs Bardet retweeted
Today, we - @stark_lab and @Eileen_Furlong lab (@EMBLheidelberg) - report the design of 40 synthetic enhancers for 5 tissue types in fruit fly embryos, in vivo. With only a few hundred enhancers per tissue for training, we adopt a stepping-stone transfer-learning approach: (5/N)
Anaïs Bardet retweeted
🧬Opening for a postdoc in my group @NCMMnews @UniOslo @UniOslo_MED @unioslo_mn to generate deep learning models to enhance JASPAR @jaspar_db & UniBind, boosting gene regulation research. Project in collaboration with @anshulkundaje, @WyWyWa.
Plz share
jobbnorge.no/en/available-jo…
Anaïs Bardet retweeted
New faculty position in Gene Regulation just posted at at Penn State!
Come join the fantastic collaborative environment in the Center for Eukaryotic Gene Regulation ( cegr.psu.edu )!
Review of applications starts Nov. 1st
psu.wd1.myworkdayjobs.com/en…
Check out MethyLasso, our new method to identify DMRs, LMRs, UMRs and DMVs from WGBS data
biorxiv.org/content/10.1101/…
Anaïs Bardet retweeted
Super thrilled for @ISMBinfo @ISCB_RegSys RegSys track starting today! 🔬💻 🎉 Two days of fantastic science await with an incredible lineup of speakers. 🌟 Join us in room Rhone 2 for a deep dive into regulatory systems genomics.
#ISMBECCB2023 #RegSys
Anaïs Bardet retweeted
📢 Join us at ISMB/ECCB 2023 in Lyon from July 23-27!
I wanted to share my excitement and encourage all of you in the scientific and computational biology community to join!
See you there!
invt.io/1txbcqry7sh
#ISMBECCB2023 #ComputationalBiology #Conference #Lyon #Virtual
Anaïs Bardet retweeted
We are looking for a bioimage analyst to join our team at the IGBMC Imaging Centre. More details here forum.image.sc/t/looking-for… or DM me. @NEUBIAS_ @RTMFM1 @GDR_ImaBio @IGBMC @RISE_micro @Fr_BioImaging #bioimageanalysis
Anaïs Bardet retweeted
For those interested in #germline_genes and #DNA_methylation, our paper with a systems view of germline genes regulation is out.
@a_bardet
@umr7242
academic.oup.com/nar/advance…
Anaïs Bardet retweeted
Registration and early abstract submission now open for the next ISMB/ECCB meeting iscb.org/ismbeccb2023. Join us July 23rd to 27th in sunny Lyon to hear about all the most exciting computational biology youtube.com/watch?v=STfQSV9a… @ISMBinfo
Happy to share that I have been awarded an ANR JCJC grant (young researcher) to study TF binding in the context of chromatin !
Anaïs Bardet retweeted
Hey, there are PhD positions on Computational Biophysics available in my lab! Interested? #PhDpositions #ComputationalBiology #ComputationalBiophysics jobrxiv.org/job/igbmc-27778-…
