WikiPathways is an open, public platform dedicated to the collection and curation of biological pathways by and for the scientific community
Joined March 2011
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WikiPathways retweeted
Excited to join #NWOLife this year! I already enjoyed the dinner discussions yesterday, a walk on the beach this morning and the first keynote by Frans de Waal!
I am also excited to give a talk tomorrow about @WikiPathways and the COVID-19 Disease Map project in track 5.
WikiPathways retweeted
‼️ #NetBio abstract deadline is coming up ‼️
‼️ 20 April 2023 ‼️
#ISMB2023 #ECCB2023 will be held in Lyon from 23-27 July.
Share your research with the #NetBio community in the #networkbiology track!
iscb.org/ismbeccb2023
WikiPathways retweeted
7th Disease Maps Community Meeting 2023 in Maastricht (#DMCM2023)
📢Last chance to register and submit your poster abstract: Fri 24 March 2023!
We have an exciting program with 3 keynotes, 10 selected talks, tutorials, posters, and #networking sessions.
disease-maps.org/DMCM2023
📢Join us in Maastricht for the 7th Disease Map Community Meeting (#DMCM2023)
Present your work and get input from experts in the community, and importantly, meet potential partners for new disease map projects!
@MaastrichtU @MaCSBio @bigcat_UM
disease-maps.org/DMCM2023
WikiPathways retweeted
The NDEx IQuery paper is published in Bioinformatics!
Thanks to @xanderpico, @benjamingyori and the whole @NDExProject team for their hard work!
Read it now: bit.ly/3L63S0M
@WikiPathways @IndraSysBio @sigpathproject @signor_database @cbioportal @cytoscape #nciitcr
WikiPathways retweeted
📢Join us in Maastricht for the 7th Disease Map Community Meeting (#DMCM2023)
Present your work and get input from experts in the community, and importantly, meet potential partners for new disease map projects!
@MaastrichtU @MaCSBio @bigcat_UM
disease-maps.org/DMCM2023
WikiPathways retweeted
I am very happy to share that our manuscript "A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms" is now available as a preprint on bioRxiv.
biorxiv.org/content/10.1101/… #covidmap @YenUniT @WikiPathways @CovidPathways
WikiPathways retweeted
New to the field of #SystemsBiology? Visit the hands-on tutorial workflow on the @ELIXIREurope training website and access lots of great #OpenAccess introductory modules telling you how to use and build @biomodels. Built at #BioHackEU22 @ElixirTess
tess.elixir-europe.org/workf…
WikiPathways retweeted
IQuery v1.4 is now released!
A new multi-method, pathway-based gene set interpretation tool integrated with @cytoscape and @NDExProject
Read the preprint: bit.ly/3TXZrpY
@WikiPathways @IndraSysBio @sigpathproject @signor_database @cbioportal @biorxiv_bioinfo #nciitcr
WikiPathways retweeted
Our 3-day @ZonMw COVID19 workshop on pathway curation and -omics data analysis started today at the #MECCMaastricht. We are excited to welcome participants in Maastricht and online!
@WikiPathways @CovidPathways @MaastrichtU @bigcat_UM @MaCSBio
bigcat-covid19.github.io/Wor…
WikiPathways retweeted
@cbioportal queries now include #PathwayEnrichment analysis powered by @NDExProject iQuery!
Analyze your genes of interest annotated with alteration frequencies in the context of curated pathways from @WikiPathways , @signor_database and NCI-Nature PID.
#NCIITCR #networkbiology
WikiPathways retweeted
Don't miss the first molecular pathway focusing on pleural #mesothelioma in @WikiPathways : frontiersin.org/article/10.3….
Congrats to Ferdinando Cerciello, @mmarvinm2 and all other contributors
@CRCordeliers #mesotheliomaresearch #asbestos #zucmanlab
WikiPathways retweeted
new: "A Community-Driven, Openly Accessible Molecular Pathway Integrating Knowledge on Malignant Pleural Mesothelioma" doi.org/10.3389/fonc.2022.84…
ALT Figure 2: BAP1 pathway section. Genes and proteins are visualized as black rectangles, and frequently mutated tumor-suppressor genes are drawn as red diamonds. Green rounded rectangles are links to other pathway entries in the WikiPathways database.
WikiPathways retweeted
Finally, our chapter for the 'Physician's Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases' book is now available #openaccess. Find it here: doi.org/10.1007/978-3-030-67… @ynmc_benelux @metabolomics_nl @WikiPathways @egonwillighagen @mkutmon
WikiPathways retweeted
WikiPathways now officially an @ELIXIREurope service: elixir-europe.org/services/l…
WikiPathways retweeted
*Biocurator Job Vacancy* You will be based in Cardiff University and will provide core support for a new curation project, building lipid biochemical pathways in LIPID MAPS & @WikiPathways. Please retweet @EpiLipidNET @LipidomicsBABR @SwanseaMedicine
bit.ly/3GIPKWv
WikiPathways retweeted
Unfortunately, online and not in Leiden, but I really enjoy the inspiring talks and great discussions at #SWAT4HCLS.
It was great to share ongoing developments in the @WikiPathways project.
#pathwaycuration #dataanalysis #networkbiology @CovidPathways
swat4ls.org/workshops/leiden…
WikiPathways retweeted
▶️Listen to PubReading [66] - The 2021 Nucleic Acids Research database issue and the online molecular biology database collection - D. Rigden and X. Fernandez🔊 rss.com/podcasts/pub-reading… @DanielRigden @xosegb @RfamDB @RNAcentral @WikiPathways @ensembl @GenomeBrowser @canSAR_ICR
WikiPathways retweeted
Nhung Pham is presenting our work on tissue-specific pathway activity in COVID-19 patients today at the 6th Disease Map Community Meeting
@WikiPathways @CovidPathways #DMCM2021
disease-maps.org/DMCM2021
WikiPathways retweeted
Introducing PharmGKB Pathways in Progress. We're making our pathway GPML files and underlying #data available to users as we work on gathering more evidence. Learn more at our blog pharmgkb.blogspot.com/2021/1… #pharmacogenomics #pharmacology
ALT Screenshot of the PharmGKB Tamsulosin Pathway in Progress
WikiPathways retweeted
1/ If you want to see C21st scientific graphical data, follow this thread on @WikiPathways .
wikipathways.org/index.php/W…
