'Omics data re-use made easy for bench researchers in cell signaling. #shareomics
Houston, TX
Joined December 2017
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Happy to report "Consensus transcriptional regulatory networks of #coronavirus-infected human cells", an SPP/
@NDExProject collaboration, was published today in
@ScientificData. Putting #FAIRdata into practice in the fight against #SARSCoV2 & #COVID19. tinyurl.com/y43cddrx
Signaling Pathways Project retweeted
📢 Join us on May 19 at 11 am PT for a dkNET webinar on “Leveraging Computational Strategies to Identify #Type1Diabetes Risk and Clinical Trial Responder Status”, presented by Dr. Wenting Wu, the 2022 dkNET Pilot Program in #Bioinformatics Awardee
Link: dknet.org/about/blog/2623
Signaling Pathways Project retweeted
Don't miss the opportunity to hear Dr. Nabil Rabhi speak about his research on “Defining the Spatiotemporal and Molecular Trajectory of Beige Adipogenesis”! Join us on May 12 at 11 am PDT. dknet.org/about/blog/2612
#dkNETwebinar #Bioinformatics #BeigeAdipogenesis #obesity #RNAseq
Signaling Pathways Project retweeted
The dkNET Summer of Data Student Program allows students in current labs to build #datamanagement skills & learn online resources+ receive #stipend!
Applications due: May 8, 2023
👉 Learn more: dknet.org/about/Summer-Progr…
#endocrine #diabetes #obesity #metabolic #research
Signaling Pathways Project retweeted
The deadline was extended - so students, don’t wait!
The dkNET Summer of Data Student Program applications are due May 8, 2023! (dknet.org/about/Summer-Progr…)
#FAIRdata #OpenScience #reproducibility #rigor
Signaling Pathways Project retweeted
IL17A blockade with ixekizumab suppresses MuvB signaling in clinical psoriasis bit.ly/3LZ5tpk #JIDJournal #dermscience #dermtwitter
Signaling Pathways Project retweeted
Don't forget to check out #dkNET community news, events and #funding announcements in April 2023! dknet.org/about/blog/2602
#diabetes #metabolic #bioinformatics #webinar #summerprogram #datamanagement
Ever seen ads for #taltz on TV and wondered what its MOA is in resolving psoriasis? Wonder no more - collaborating with @EliLilly and @NDExProject we show how Taltz blocks an IL17A-MuvB pathway to inhibit keratinocyte proliferation in clinical #psoriasis bit.ly/3JVUKcU
Signaling Pathways Project retweeted
Do you want to learn #datamanagement skills & the best practices to enhance scientific reproducibility? The 2023 #dkNET Summer of Data Student Program is open to students in an NIDDK disease-related field lab during summer 23', from h.s. to grad.
Info: dknet.org/about/Summer-Progr…
Signaling Pathways Project retweeted
This thoughtful article came out while I was away during the holidays.
Reviewing knowledgebase and database grant proposals in the life sciences: the role of innovation academic.oup.com/database/ar…
Signaling Pathways Project retweeted
Vote for our entry TODAY! dkNET/SPP/NDEx's Type 1 Diabetes project have been named finalist in the DataWorks! Challenge!
dknet.org/about/blog/2532
#Type1diabetes #diabetes #datasharing
Signaling Pathways Project retweeted
dkNET/SPP/NDEx teams built a web resource for the role of circulating immune cells in Type 1 Diabetes. Discover about our project and vote for our entry before December 21, 2022: herox.com/dataworks/round/24…
#Type1Diabetes #Datasharing #NIHdata #NIDDK @NIDDKgov
Don't miss your chance to vote for your favorite #DataWorks finalist! See how reusing or sharing data has furthered biological and/or biomedical research.
#NIHData #Datasharing
herox.com/dataworks
ALT Vote Today! Crowdsourced award for data sharing and reuse. Meet the finalists and vote for your favorites Herox.com/dataworks 106 teams, 536 people, and 26 countries were represented, with disciplines in biochemistry, clinical research, genomics, immunology, molecular biology, and neuroscience.
SPP has been shortlisted for the @NIH and #FASEBdataworks prize, which recognizes data reuse in scientific discovery. With @NDExProject and @dkNET_Info we built a web resource for the role of circulating immune cells in #t1d. Vote for our entry here! bit.ly/3VmtM2o
Signaling Pathways Project retweeted
IQuery v1.4 is now released!
A new multi-method, pathway-based gene set interpretation tool integrated with @cytoscape and @NDExProject
Read the preprint: bit.ly/3TXZrpY
@WikiPathways @IndraSysBio @sigpathproject @signor_database @cbioportal @biorxiv_bioinfo #nciitcr
Our new article “Transcriptional regulatory networks of circulating immune cells in type 1 diabetes: a community knowledgebase” is now published in iScience bit.ly/3P7Cnm7
@NIDDKgov @dkNET_Info @thesugarscience @NDExProject
#t1d
1000 thanks to the
@dkNET_Info development team at @UCSDHealthSci for making our @NIHSTRIDES
-funded migration to
@awscloud happen. Thanks to them we’re now in a stable hosting environment to continue supporting the @NIDDKgov
community bit.ly/3LamE3X
And the moral of the story is, a gene’s function is not limited by its name.
The Takeuchi group has discovered that #cyclinJ, a member of a family of proteins best known for controlling the cell cycle, dampens inflammatory responses by controlling #macrophage metabolism, not proliferation. @KyotoU_News fcld.ly/4qza5zm
Signaling Pathways Project retweeted
A clinical trial shows a #probiotic therapy supports weight gain in severely malnourished Bangladeshi infants by restoring levels of #Binfantis, a member of the infant gut #microbiome that breaks down breast milk and plant sugars. @WUSTLmed #Malnutrition fcld.ly/kyi2br4
Signaling Pathways Project retweeted
Stop by our oral presentation, “#dkNET Hypothesis Center: A Hub for FAIR Data, Online Resources and Hypothesis Generation” at the 9th Annual Physiological Omics Group Conference Session (PA Conv. Cntr, Room 202A), @ 13:15-30 PM EDT, April 2! #ExpBio
Link: dknet.org/about/blog/2423
Signaling Pathways Project retweeted
Check out this newly published paper to learn how researchers used SPP @sigpathproject consensomes to identify transcriptional targets of bisphenol-A & other #endocrine disrupting chemicals! Learn SPP @ dkNET HypothesisCenter science.org/doi/10.1126/scie…
