Associate Principal Scientist @ Merck
Philadelphia, PA
Joined June 2019
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Check out our recent paper! We used DNA barcodes to identify rare cells that are uniquely susceptible to respiratory viruses.
So awesome to have this great paper from @SamReffsin and Sara Cherry out! In it, we use retrospective clone tracing to show that there are particular single cell states that are more susceptible to viral infection (both SARS-CoV-2 and flu)!
cell.com/cell/fulltext/S0092…
Ever struggled with manual and tedious image analysis pipelines? Check out Piscis, developed by @zwniu!
1/ Very excited to share a preprint of my first, first-author paper @arjunrajlab on Piscis, a fully automatic deep learning algorithm for spot detection in fluorescence microscopy images! (e.g., single-molecule RNA FISH) biorxiv.org/content/10.1101/…
If you're looking for a postdoc position, definitely check out Yogesh's lab! An amazing scientist, mentor, and all around great person!
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Sam Reffsin retweeted
I'm really excited to present work from @ophirshalem’s group with my outstanding co-first author Yevgeniy Serebrenik @YSereb to tag and manipulate proteins at scale, which we use to study the #proteome and #proteostasis biorxiv.org/content/10.1101/…
Very excited to share our work on identifying novel transcriptional states that drive variability in SARS-CoV-2 infection at the single cell level! biorxiv.org/content/10.1101/…
A huge thanks to @arjunrajlab and Sara Cherry for their incredible mentorship during this project. In addition, this manuscript wouldn’t be possible without the help of Jesse Miller, Kasirajan Ayyanathan, Maggie Dunagin, @uffdaALLberries , and Dave Schultz.
Also thank you to @yogeshgoyallab , @BenEmert , Phil Burnham, and the other members of the Raj and Cherry labs for their valuable input!
Super excited to see what the future holds for the incredibly talented and creative @yogeshgoyal03. A must check out lab for anyone looking for a postdoc position in the fields of cancer bio or development
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Sam Reffsin retweeted
Excited to announce our collaborative research grant awardees. 2 great teams will be working on projects that bridge #regenmed and #covid19 research.
Team 1: @FlyByVirus @arjunrajlab @sydshaffer @ophirshalem
Team 2: @vaughandy @montserrat
Congratulations and good luck!
Sam Reffsin retweeted
If you need a distraction during this immense time, consider checking out a new preprint from the Raj lab.
biorxiv.org/content/10.1101/…
The following thread will summarize what we found.
Sam Reffsin retweeted
Today we are sharing a research protocol for SHERLOCK-based COVID-19 #coronavirus detection, and hope it will help others who are working to combat the outbreak. We will continue to update this as we make further progress: static1.squarespace.com/stat…