Open data linkage, visualization and sharing for genomic epidemiology and phylogeography @thecgps @bdi_oxford Funded by Wellcome & Li Ka Shing foundation.

Joined May 2015
Genomics of SARS-CoV-2 in The Philippines - Great to see Microreact use for delivering insight as part of @geco_phl @inezmedado @RITMPH
Replying to @geco_phl
We've also made a @MyMicroreact project to take a look at what we know about #SARSCoV2 in the #Philippines so far (using all the shared GISAID and NCBI genomes). Take a look! microreact.org/project/4hz5H…
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Thank you for flagging @sciolato We had the team work tirelessly to sort out and here you go. This project also shows another new(ish) feature of being able to use emoji's as icons, and also linking directly to a Google Sheet. #OneLessKiwiproblem Aroha! microreact.org/project/5eNVe…
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NEW TREE VIEWER UPDATE: All projects now feature a vastly enhanced tree viewer (phylocanvas) that scales to 100s of thousands of leaves - here's a data linked tree of global SARS-CoV-2 genomes via the @CovidGenomicsUK Check out your projects. microreact.org/project/cogco…
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Replying to @flashton2003
Hi @flashton2003 sure is.. Here's a project, just for you, which contains exactly that - see through map markers and tree leaves. If you use __autocolour on any column its done automatically. let us know if helps as there are other ways: microreact.org/project/flash…
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and data available here: microreact.org/project/ByXyX…
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Come and see @MyMicroreact in action this Saturday Nov 17th at the Wellcome Genome Campus Open Saturday. @TheCGPS will be showing how #AntibioticResistance can quickly spread around the world with @sophia_david3 @nwheeler443 goo.gl/MTkK4R #StopDrugResistance #WAAW18
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Collect field data via mobile phone with @EpiCollect and integrate with @MyMicroreact - Tutorial from @mirkomen77 : goo.gl/Ys3GN2
V2 -that's enough for now.. although.. coming soon: add a .dot file on project creation for a network viewer..
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V2 new features #5 : use the lasoo tool to draw around points on map or tree and filter
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V2 new features #4 : for an interactive legend click the tab on the middle of the right hand side of the screen
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V2 new features #3 : pie charts on maps show distribution of multiple value3
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V2 new features #2 : block viewer - any coloured variable can be added to a tree
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