Synthetic Biology. Designer cells and organelles. Space plants and microbes. Optimization of DNA delivery: conjugation, cell fusion.

London, Ontario
Joined November 2017
Karas Lab retweeted
On behalf of 108 colleagues and friends from 11 countries, thrilled to share the first paper from our 100 #Diatom Genomes Project (100DGP). Just out @PLOSBiology | @micronorwich | @uniofeastanglia |@jgi doi.org/10.1371/journal.pbio…
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Karas Lab retweeted
Today in @Nature we report how AI-guided redesign enhances protein evolution. Integrating ProteinMPNN sequence design with autonomous laboratory evolution, we establish a workflow to engineer enzymes with improved properties over those evolved from natural proteins. Redesigned starting points consistently evolve an expanded fitness landscape, reaching new function with higher activity, specificity, and stability than their natural counterparts. drive.google.com/file/d/1C-Q… 1/14
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Karas Lab retweeted
Do eukaryotes need introns? Seems like they don’t. Very nice use of synthetic genome engineering in yeast to remove all introns and lose the splicosome. cell.com/cell/abstract/S0092…
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Karas Lab retweeted
Excited to share our new preprint co-led with Hwan Su Yoon and Hocheol Kim. The genomic basis of evolutionary stasis in the 500-million-year-old red #seaweed genus Ahnfeltia. A living fossil in coastal oceans. It also appears to be an ocean cactus... biorxiv.org/content/10.64898…
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Karas Lab retweeted
Awesome new synthetic biology paper in Nature today led by Bolin An (SIAT) and Zijay Tang (Harvard/MIT) on cell fate gene circuits that specialise cell progeny to different tasks and control their population ratios. This is the most #synbio paper ever! nature.com/articles/s41586-0…
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Karas Lab retweeted
Just out @NatureComms Our new paper led by @KarasLab with our help (Thalassiosira pseudonana). Breaking the cell wall for efficient DNA delivery to #diatoms @NorwichResearch @uniofeastanglia @UEAResearch nature.com/articles/s41467-0…
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Thanks to KAUST Discovery for this great write-up on our work. Algae and the Chocolate Factory! @MLPMasson @ASU_AzCATI Prof. Peter Lammers, @Barbara_C_F @MikeD_Fox @KAUSTCoreLabs @MarsGlobal discovery.kaust.edu.sa/en/ar… Beautiful image by @HenoHwang
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#WesternU welcomes The Canada Impact + Chairs program launched by Minister Joly yesterday. This program will help attract the best and brightest to support innovation, knowledge translation and new discoveries that drive social and economic growth.
📢Today, the #GC launched new programs to attract international researchers to Canada. ✅ Canada Impact+ Research Chairs ✅ Canada Impact+ Emerging Leaders Get all the details here: canada.ca/en/impact-plus-cha… @SSHRC_CRSH @NSERC_CRSNG @CIHR_IRSC @InnovationCA @ISED_CA
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NEW! We are now inviting #Perspective papers! Share your commentary, discuss emerging topics, and propose new ideas that can inspire future research. Learn more ▶️ow.ly/5MWw50WFlVL #Microbiology #AcademicWriting #CanadianScience
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A new review paper from our lab courtesy of @JazzSynBio is published in @TrendsinBiotech - In this review, we look at the many opportunities for synthetic biology to be used in the research and applications of Holobionts.
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Bacterially grown living materials with resistant and on-demand functionality "K. rhaeticus produces a cellulose matrix that encapsulates resistant Bacillus spores, allowing them to germinate and conduct programmable functions under permissive conditions" science.org/doi/10.1126/scia…
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We're hiring for 2 postdocs to work in our lab in London on the newly announced Wellcome Trust SynHG project. If you know people looking to work on big-scale ambitious science like this, please RT and share this with them. Apply by 7/20, interviews in Aug. imperial.ac.uk/jobs/search-j…
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The only rule in biology is that there are exceptions to every rule. This is what makes biology infinitely exciting; even when you think you’ve got the complete view, the floor can drop out from underneath you at any given moment. Case-in-point: The nucleus is the thing that makes eukaryotes...well, eukaryotes. It's the part of the cell that stores the genome, separating DNA from the cytoplasm and other organelles. (Bacteria do not have nuclei.) For decades, scientists thought that each nucleus contains one or more haploid sets of chromosomes. But there are exceptions. Red blood cells, for example, don’t have nuclei at all. (They expel their nuclei during maturation to maximize hemoglobin concentrations.) Cells in the eye lens, too, lose their nuclei and organelles during differentiation, thus becoming transparent. And so on. But now there is yet ANOTHER exception to this rule, and it’s one I hadn’t seen before. For a study in Science, researchers discovered that two types of pathogenic fungi that infect plants, called Sclerotinia sclerotiorum and Botrytis cinerea, have two different nuclei. And instead of storing a full set of chromosomes in each nuclei, they instead “distribute their chromosomes such that each of their nuclei contains only a subset of the haploid chromosomes.” The authors confirmed this by throwing a kitchen sink of methods at these cells; chromosome counting, DNA measurements using flow cytometry, single-nucleus PCR, and more. Nobody knows why the fungi do this, but the scientists claim (in their discussion) that it could enable them "to respond and adapt more effectively to local environmental stresses within their extensive mycelial networks. Nuclear shuffling may facilitate the rapid generation of new genotypes, enhancing adaptability to changing environments.” There is also evidence that the chromosomes within each nucleus may briefly collide during cell division, before going back into their separate nuclei. This is a great paper. It is simple, to the point, and challenges the status quo. It has serious potential to become a “classic” of the genre. Link: science.org/doi/10.1126/scie…
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Karas Lab retweeted
Check it out! It includes a joint paper from our lab and the @KarasLab #diatoms #plants #algae #Engineering
𝐍𝐞𝐰 𝐒𝐩𝐞𝐜𝐢𝐚𝐥 𝐈𝐬𝐬𝐮𝐞! 🌱Plant engineering: advances, bottlenecks, and promise onlinelibrary.wiley.com/doi/… Focused Reviews & Technical Advances 🌿Plant transformation tech 🧬Gene editing & synthetic biology 🔧Emerging engineering strategies breakthroughs & challenges 🧵⬇️
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Together with Liyam Chitayat and Lorenzo Magni, I co-organized the inaugural edition of the Symbiogenesis Seminar Series, an online event focused on symbiogenesis.
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