@DukeSequencing
Joined March 2013
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  • Following24
  • Followers226
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Come work with a great team! Apply even if you don’t think you meet all the qualifications!
Duke Sequencing@DukeSequencing5 Dec 2023
We're Hiring! #jobopportunity for Lab Research Analyst. Get involved with #nextgensequencing and top tier #research at #DukeUniversity bit.ly/3NfMJ50
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Oxford Nanopore
@nanopore13 Oct 2016
PromethION Early Access Programme: early phase now fully subscribed. Switching tomorrow to new phase: bit.ly/2dIg0aG
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Michael D'Angelo@mdangelo3213 Oct 2016
This will be amazing! Was worried about the usefulness of G10K when short reads were planned, now I'm excited again! genomeweb.com/sequencing/gen…
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Erich Jarvis@erichjarvis20 Sep 2016
Yes! @Genome10K & bird @B10K_Project, we are now near ready to start generating more completely assembled genomes with our @PacBio Sequel xitter.cf/DukeSequencing/status/…
Duke Sequencing@DukeSequencing20 Sep 2016
Just received our @PacBio Sequel. Ready and excited to tackle big genomes @erichjarvis @dukegcb
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Shaun Jackman@sjackman3 Jun 2016
GAEMR (Genome Assembly Evaluation, Metrics and Reporting) looks useful! Anyone used it? Scale to human assembly? broadinstitute.org/software/… – at Downtown, Vancouver
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Jason Chin@infoecho3 Jun 2016
Someone asked a question about PacBio diploid assembler paper 1 yr ago from #sfaf16 here the preprint is: biorxiv.org/content/early/20…
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Michael Schatz@mike_schatz4 Jun 2016
Phased Diploid Genome Assembly with Single Molecule Sequencing biorxiv.org/content/early/20… w/@infoecho @sedlazeck @marianattestad @PacBio et al
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Pawel Herzyk@peherzyk3 Jun 2016
And this Ladies and Gentlemen is a personalised minION @nanopore @polyomics
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Cool use of next-gen sequencing to decode the Cabernet Sauvignon grape. That's a tasty genome! @mike_schatz biorxiv.org/content/early/20…
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PacBio
@PacBio21 Apr 2016
Yes! Check out our blog post for a quick summary of the paper: pacb.com/blog/benchmarking-s… xitter.cf/JadeMOLeary/status/723…
Jade O'Leary@JadeMOLeary21 Apr 2016
Cost effective high-throughput 16s RNAseq solves short read taxonomic resolution issues. @PacBio: the new standard? nature.com/ismej/journal/vao…
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nextgenseek@nextgenseek1 Apr 2016
.@pacbio Long-read sequence assembly of the gorilla genome science.sciencemag.org/conte…
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Dale Yuzuki
@DaleYuzuki12 Feb 2016
Jonas Korlach (PacBio) - some concluding comments: 75% of variation is not captured by SNVs. There are SVs, Haplotypes, epigenetics #AGBT16
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Orli Bahcall@obahcall13 Feb 2016
Christopher Hill brings us Susie3, using @PacBio for new gorilla genome assembly; >800x improvement in contiguity #AGBT16
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Matthew Seetin@mseetin13 Feb 2016
JK: Repeat expansion in ALS is 100 percent GC for thousands of bases. Sequencing and characterization no problem on @PacBio Sequel #agbt16.
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Jason Chin@infoecho13 Feb 2016
JK, more than 900 pure GC, only PacBio can read through it #AGBT16
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Matthew Seetin@mseetin13 Feb 2016
RD: "@PacBio still the gold standard for bacterial assembly." Flow cell consistency an issue for ONT, but results coming along #agbt16
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euan ashley@euanashley12 Feb 2016
Best "any questions" slide ever. #AGBT16
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Dale Yuzuki
@DaleYuzuki12 Feb 2016
Just having dessert and @nanopore sequencing at #AGBT16 - @pathogenomenick and @mattloose. Good times!
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#AGBT16 PP: genes with a DNA peak within 1kb of transcript are more highly expressed
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Dale Yuzuki
@DaleYuzuki12 Feb 2016
Paolo Piazza (U Oxford) Linking epigenetics and gene expression at single cell levels using SMART-ATAC-seq #AGBT16
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