PhD candidate | 🇧🇷 | https://xitter.cf/t.co/2ylbrLK403 | ESR1 @GlobalLUMC and @CDDLeiden Interested in comp-chem, drug discovery, and AI. Likes music 🎸
Leiden, The Netherlands
Joined March 2020
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Ever use ChEMBL to prepare datasets for QSAR? Do check this one out! We support data quality flags and different ways of aggregating your data:
Aggregating the same compound–target activities or, if you want, only if they were reported in same cell lines, BioAssay Ontologies…! – at Groningen, Nederland
The latest by @CDDLeiden : "CAPRICHO: Interpretable Quality Flagging and Flexible ChEMBL Bioactivity Curation for QSAR Modeling" ; a Python command-line tool addressing.
Great work by @DavidAraripe , @OlivierBeqgn , and Srijit Seal...!
pubs.acs.org/jcisd8/article/…
gente como assim até o Macron é otaku 😠– at Groningen, Nederland
Une annonce hors normes.
Vous connaissez mon intérêt pour les mangas. Vous savez aussi ma détermination à attirer en France les investissements qui créent des emplois et rendent possibles les projets les plus ambitieux.
Avec l’Arabie saoudite, nous faisons une annonce sans précédent.
À Cergy-Pontoise, 3 parcs à thème vont voir le jour.
6 milliards d’euros d’investissements.
22 000 emplois créés.
Du jamais vu depuis Disneyland Paris.
Une nouvelle destination mondiale.
Ici, en France.
Merci à Qiddiya et à l’Arabie saoudite pour leur confiance en notre pays, en nos talents et en notre avenir.
C’est tout le sens de Choose France : aller chercher les projets les plus ambitieux et faire de la France le pays où ils deviennent réalité. Créer des emplois. Faire rayonner la France.
Nous n’avons pas fini de surprendre le monde.
Très fier de cette réussite.
Primeira vez no shinkansen do Japão (trem-bala). Estávamos tirando selfies na frente do trem quando o condutor desceu e se ofereceu pra tirar fotos da gente 🥹 Ao povo japonês e sua gentileza: muito obrigado!!
Só me arrependo de não pedir uma selfie da gente com o condutor – at Chūbu, Nagano
I really like using the ChEMBL_Structure_Pipeline package for chemical standardization, but the package is currently logging several deprecation warnings from RDKit. I made a pull request to the package with the fix, is there any maintainer that could merge it? @ChEMBL (PR 57)
David Araripe retweeted
We are hiring! Come join our team. We still have GPUs and cake, but also very intelligent and motivated students..!
This is a 2-year position in the area of computational drug discovery.
universiteitleiden.nl/vacatu…
David Araripe retweeted
I am looking for a technician in Artificial Intelligence and computational drug discovery. You will be part of my team and embedded in Oncode Accelerator (AI Platform). Come join us at @CDDLeiden , we have cake and GPUs!
Details: universiteitleiden.nl/vacatu…
David Araripe retweeted
A vacancy for a PhD student in the lab. Join us and be part of Oncode Accelerator. Collaborate with @Radboud_Uni using artificial intelligence to understand small molecules mode of action with experimental validation. (oncodeaccelerator.nl)
universiteitleiden.nl/vacatu…
If you're working with QSAR, make sure to check out QSPRpred. It simplifies your QSPR modeling with a modular Python API, covering everything fom data analysis to model deployment. Designed for reproducibility, with extensive documentation and tutorials #0penSource
The latest preprint from CDD: QSPRpred: a Flexible Open-Source Quantitative Structure-Property Relationship Modelling Tool
Comes with tutorials en more, code: github.com/CDDLeiden/QSPRpre…
chemrxiv.org/engage/chemrxiv…
David Araripe retweeted
I am looking for an excellent postdoc candidate to work with me on the forefront of AI and physics based methods in early stage drug discovery. More information can be found on the university website:
Postdoc AI and physics based drug discovery universiteitleiden.nl/vacatu…
David Araripe retweeted
!!Postdoc vacancy!!
Postdoc organic synthesis and computational high throughput drug discovery
pomplunlab.com/open-position…
Please retweet (or reX or whatever) and apply until Nov 15th. @LACDR @LED3hub @Heitman_lab @GJPvWesten
David Araripe retweeted
You are, in large part, an industrial product
The nitrogen for half of the protein in your body was made using the century-old Haber-Bosch process, which saved 2.7B lives. (On the other hand, it also uses 5% of the world's natural gas & the inventors might also be war criminals)
David Araripe retweeted
The latest: Collaboration with Galapagos demonstrates multi-task ML models outperforming single-task models on a balanced sparse kinase dataset. Shown for D-MPNN (chemprop) + boosted tree (pyboost>xgboost) @sohvi_luukkonen @gjpvwesten and @LenselinkBart pubs.acs.org/doi/10.1021/acs…
David Araripe retweeted
The first Leiden / Prague Symposium on Cheminformatics was a great succes!
Next year we come to Prague! CC @martin_sicho , @svozil , @DavidAraripe , @sohvi_luukkonen , @m_gorostiola , @GJPvWesten , et al..!
David Araripe retweeted
Happy to be in @ihmc2022 sharing recent findings of my ongoing PhD project on #metabolomics and #microbiome in #pregnancy #cordblood at Poster 28!
Also deeply honored to have been selected as Young Excellent Abstract Award and to present my results tomorrow, at 18h JST!
Our very own PhD, @MillaGois will be giving a presentation at the Student Best poster awards, on Wednesday 9th at 18:02 about #metabolomics during #pregnancy (3/5) Congratulations to Milla for being awarded this opportunity! Don't miss her poster 28! (3/6)
David Araripe retweeted
Yesterday brought to an end the 3rd @DrugTrain_ITN consortium meeting in Aachen @RWTH where we attended a fantastic training course and had the opportunity to present our research to-date. Thanks to @twan_lammers and @k_vedangi for hosting such a great event! #DRUGtrain #ITN
David Araripe retweeted
Grateful and happy to be part of the DRUGtrain Marie Curie Training Network focusing on Drug Repurposing 💊. Looking forward to hosting the next consortium and training meeting at CBMS in Aachen on October 18-19. @DrugTrain_ITN @k_vedangi
8 beneficiaries across EU will join forces to train a next generation of multi-disciplinary researchers in biomedical and (bio)pharmaceutical sciences, offering a timely paradigm to improve drug repurposing with a focus on ADPKD. Follow us here: drugtrain.eu
Cycling home today and went past someone casually cycling *AND* reading a book. The Netherlands never ceases to amaze me 😅
Inspiring talk today by @CraigMCrews about proteolysis targeting chimeras at the Havinga lecture hall! @UniLeiden @led3network @LACDR
