Machine Learning in Structural Biology workshop co-located with NeurIPS 2025 & at EurIPS 2025. Dec 7.
San Diego, CA & Copenhagen, DK
Joined August 2020
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MLSB (in San Diego + Copenhagen) retweeted
Don't worry if you missed MLSB! We recorded all of the talks!! 🕺💃
YouTube: youtube.com/@MLSBWorkshop/vi…
Absolutely blown away by the turn out at @workshopmlsb today.
Thank you to the >600 people who came through the venue, and >150 that joined over Zoom throughout the day. Truly an exciting time to be innovating in ML for Structural Biology ♥️
MLSB (in San Diego + Copenhagen) retweeted
Absolutely blown away by the turn out at @workshopmlsb today.
Thank you to the >600 people who came through the venue, and >150 that joined over Zoom throughout the day. Truly an exciting time to be innovating in ML for Structural Biology ♥️
MLSB (in San Diego + Copenhagen) retweeted
I am so grateful to our wonderful speakers, sponsors, and the rest of the organizing team who took a risk and made the first independent MLSB possible.
MLSB (in San Diego + Copenhagen) retweeted
MLSB this year was also a trans-continental feat.
A wildly successful MLSB @ EurIPS happened in Copenhagen at the same exact time. And we finally reached accepted submissions from universities in every habitable continent, including Africa 🫶
MLSB (in San Diego + Copenhagen) retweeted
It was a great opportunity to talk at the MLSB. I hope I converted at least one person to study RNA instead of proteins :)
MLSB (in San Diego + Copenhagen) retweeted
Had a great day at @workshopmlsb ! Thanks so much to the organizers for the invite and putting on a fantastic program!
MLSB (in San Diego + Copenhagen) retweeted
And you can find me giving two talks on Sun!
- 8:10AM bright n early at the Frontiers in Probabilistic Inference (FPI) workshop: fpineurips.framer.website
- 12:45PM at good ol' ML for Structural Biology @workshopmlsb 💙: mlsb.io/
MLSB (in San Diego + Copenhagen) retweeted
Am super excited to be speaking at @workshopmlsb on Sunday!
I’ll be around Saturday, but don’t have a conference reg, and am too stingy to pay for it for just a day.
Anyone else in this boat?
Is the plan to try to sneak into some workshops and then maybe go to the beach? 👀
MLSB (in San Diego + Copenhagen) retweeted
On my way to @NeurIPSConf, San Diego. ✈️
Proud that Joel Bonnie and @TinVlasic will present on Dec 7 at the ML4LS workshop neurips.cc/virtual/2025/loc/…:
“From Base Pairs to Functions: Rich RNA Representations via Multimodal Language Modeling.”
I’ll also be giving a keynote on Dec 7 at @workshopmlsb , mlsb.io/ (co-located with @NeurIPSConf), discussing the next wave of RNA structure prediction.
Open to conversations on:
• #BioML for RNA structure prediction + optimisation
• Improving genome and cell foundation models
• AI-enabled genome assembly
• Joining us at @astar_gis — we’re hiring PhDs, postdocs, engineers, and interns in AI
just send me a DM
MLSB (in San Diego + Copenhagen) retweeted
A reminder that there is now *1 week* left until the MLSB deadline on October 1st!
Send in your 🧪bio+🤖ML papers, for either
🇺🇸San Diego,
🇩🇰Copenhagen, or
✨both✨!
🚨To accommodate the addition of EuroMLSB, we have extended the submission deadline to October 1, 2025 11:59pm AoE.
Find information on paper guidelines at mlsb.io. Submissions will be made through CMT.
MLSB (in San Diego + Copenhagen) retweeted
Most of the #EurIPS workshops now have their websites online 🙌
A lot of them have active call for participation and/or papers, so if you see something relevant to your field of research please consider submitting!
Links for workshops are available at: eurips.cc/workshops/
MLSB (in San Diego + Copenhagen) retweeted
You asked and we listened...@workshopmlsb is excited to be expanding to Copenhagen, DK at @EurIPSConf 🎉
Two workshops (San Diego & Copenhagen) will run concurrently to support broader attendance. You can indicate your ranked location preference in the submission portal💫
MLSB (in San Diego + Copenhagen) retweeted
First CASP... now Machine Learning in Structural Biology (MLSB)... sad to see workshop getting cut by Neurips. 😭
Unfortunately, the MLSB Workshop @ NeurIPS (@workshopmlsb) was rejected this year.
Feedback from the deciding committee indicates it was a coin flip decision, with 283 proposals & a number related to “computational biology”
More on the future of MLSB soon…
MLSB (in San Diego + Copenhagen) retweeted
Unfortunately, the MLSB Workshop @ NeurIPS (@workshopmlsb) was rejected this year.
Feedback from the deciding committee indicates it was a coin flip decision, with 283 proposals & a number related to “computational biology”
More on the future of MLSB soon…
MLSB (in San Diego + Copenhagen) retweeted
Has been a pleasure working with @PRX_Life to put together this special collection and share some views on what comes next!
The collection was motivated by the need to find venues to publish the awesome papers that appear at @workshopmlsb
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MLSB (in San Diego + Copenhagen) retweeted
What a pleasure to be a guest editor of the new Machine Learning in Structural Biology collection in @PRX_Life @APSphysics
We are so excited about this new venue for showcasing work at the intersection of machine learning & structural biology, including work from @workshopmlsb
This Post is from an account that no longer exists. Learn more
MLSB (in San Diego + Copenhagen) retweeted
📢 Missed the last lecture? Here's the key takeaways for the upcoming @workshopmlsb challenge: 🧵
📅 The PINDER + PLINDER + MLSB teams are organizing a training workshop Sep 24th - plinder.sh/blog/training
🎯 Tasks: flexible protein-protein & protein-ligand docking/co-folding (no holo structures available, only sequences + apo or predicted monomer!)
People will have time to train methods on PINDER/PLINDER splits (no external data!) after MLSB deadline - leaderboard opens Oct 9, closes Nov 9!
To submit to the leaderboard & qualify for the talk, methods will need either a MLSB submission (no acceptance required) or available paper/preprint at leaderboard submission time and provide runnable code with train.py & predict.py scripts (I/III) 🧵
Want to dive into deep learning approaches for protein complex prediction? Join this workshop to advance your research and contribute to the next major breakthroughs in structure prediction. It takes place online on 24/09, 3 - 8:30pm CEST
More: plinder.sh/blog/training
MLSB (in San Diego + Copenhagen) retweeted
Hope to see you and your biomolecules @NeurIPSConf ! Super excited about what's in the works for this year, stay tuned!
The Machine Learning in Structural Biology workshop will be back at #NeurIPS for its 5th edition in December! Stay tuned as we will soon share details about the stellar lineup of speakers 🌟, the call for papers 🧬, and a very exciting innovation for this year's workshop 🥁🚀!!