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⚡️ My PhD thesis is on arXiv! ⚡️
To quote my examiners it is "the textbook of neural differential equations" - across ordinary/controlled/stochastic diffeqs.
w/ unpublished material:
- generalised adjoint methods
- symbolic regression
- + more!
arxiv.org/abs/2202.02435
v🧵 1/n
Patrick Kidger retweeted
It is almost 2027 and I cannot believe we are still talking about AI drugs, this time revived by Shkreli's comments on the live All-In podcast.
There is literally no such thing as an AI drug. Never was.
So playing the game of tracking when one will be clinically approved, how many are created a year, what the cost-delta is between them versus 'regular drugs', all of these debates begin from a false premise and are thus not useful to talk about IMO.
Don't get me wrong. ML methods are extremely powerful and have already clearly and unequivocally contributed to many successful drugs. Like that's not even a debate.
Every now-genetically-validated target discovered by sequencing? Thank god we had CNNs and other older ML methods to convert the fluorophore data into useful signal.
Every small molecule developed using older ML-based classifiers during virtual screening. That's ML too.
Of course, these are the 'boring' ML methods that people don't even count anymore because they're way past their hype phase and have become silent infrastructure underpinning the whole industry.
In ten years, today's hype methods will do the same. They'll lose their sheen and people will goalpost move, or they won't even acknowledge them as AI/ML because they'll be so busy saying whatever current thing from 2035 is fake and will never contribute.
All sufficiently useful technology moves through these cycles. Once it works, it won't be called AI anymore. It will just be math. Or statistics. Or something else.
Any drug program from here on out will use some form of ML, hype or not, so arguing about some false binary whether a molecule/program is 51% AI is just ludicrous to me IMO.
This isn't even about Martin at all. Like I get his frustration, and I think it behooves anyone to be skeptical when magical elixers are passing hands.
It's just that I think this discussion has run its course and I don't think it's a good use of time.
Patrick Kidger retweeted
We’re partnering with @Anthropic to launch the biggest Protein Design Competition in the world, challenging people around the world to use AI to design new potential drug candidates for diseases that affect millions of lives.
The competition will feature five challenges, each focused on a specific disease or biological mechanism. Compared to previous competitions, it will be a big step-up in complexity and scale to push the boundaries of AI-driven protein design.
Together with Anthropic, we’re sponsoring over $1 million in experimental validation, making it possible to test more than 5,000 protein designs in our automated lab at no cost to participants. Anthropic is providing an additional $1 million in Claude credits.
All experimental results will be published openly on @Proteinbase, including designs that didn’t work, so anyone can access the data and build on what we learn.
The competition is open to everyone and free to enter. It will feature 3 tracks:
- Track 1 is aimed at expert protein designers, with up to 20 teams to be selected.
- Track 2 is targeting life science academics and industry researchers.
- Track 3 is open to everyone from tech enthusiasts to high-school students.
By combining Anthropic’s models with access to our automated lab, we want to make it possible for anyone with a laptop and an internet connection to join the global effort to advance human health with AI.
A big thanks to @Modal for contributing compute for protein design and to @TwistBioscience for contributing the DNA for the experimental validation!
Sign up link below -
Patrick Kidger retweeted
🏮Announcing the Lantern Summit in Shanghai🏮
In 2025, more new medicines launched first in China than anywhere else on Earth.
That has never happened before.
Drug development has two simultaneous accelerators:
• AI is collapsing design (weeks instead of years).
• China is collapsing development (physical iteration speed).
Here is why that matters, and what Western biotech is missing: 🧵
Proud to be an angel in Adaptyv's series A! (And no doubt a customer of everything they're building soon too.)
They deserve all of the hype that they've getting, we need an API for biology.
We raised a $40M Series A to build the automated lab for agentic biology.
Last week, we shared the work we did with @Anthropic: Claude designed proteins, sent them to our automated wet lab, and got real experimental data back.
We believe this is where biology is going: AI agents designing experiments, running them in automated wet labs, learning from the results and iterating.
But AI can only move as fast as the experiments behind it. To use the potential of AI to cure all diseases, we need to build high-throughput wet lab infrastructure: a “biological gigafactory”.
That’s exactly what we’re doing at Adaptyv.
Over the past year we’ve grown our lab throughput by over 5x and onboarded more than 100 customers, ranging from bio AI labs like @chaidiscovery and @boltz_bio to pharmas like @Roche and @novonordisk to dozens and dozens of new startups that use AI to radically speed up drug discovery.
Patrick Kidger retweeted
We raised a $40M Series A to build the automated lab for agentic biology.
Last week, we shared the work we did with @Anthropic: Claude designed proteins, sent them to our automated wet lab, and got real experimental data back.
We believe this is where biology is going: AI agents designing experiments, running them in automated wet labs, learning from the results and iterating.
But AI can only move as fast as the experiments behind it. To use the potential of AI to cure all diseases, we need to build high-throughput wet lab infrastructure: a “biological gigafactory”.
That’s exactly what we’re doing at Adaptyv.
Over the past year we’ve grown our lab throughput by over 5x and onboarded more than 100 customers, ranging from bio AI labs like @chaidiscovery and @boltz_bio to pharmas like @Roche and @novonordisk to dozens and dozens of new startups that use AI to radically speed up drug discovery.
This is a great teaching moment for me to talk drug manufacture to my AI-ish audience.
This removes a huge hurdle for developing new drugs, by standardizing the manufacturing process we used for the COVID vaccines. Particularly relevant for small biotechs vs large pharma...
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WOW! THIS IS HUGE!
**Stable clonal cell pool may be sufficient**!
Here is the new FDA FIH CMC requirements for biologics
fda.gov/media/193164/downloa…
And it's heartbreaking looking up the disease, speculating a plausible therapeutic hypothesis - and then having to say "no, sorry, I am already busy with other diseases, and the manufacture alone would take $M that I do not have". (Today, it was a genetic blindness case.)
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There's a nice line in Good Will Hunting: "it's just a handful of people in the world who can tell the difference between you and me"
I think we're now crossing the point where we'll think models have plateaued... because we poor humans can no longer perceive the difference.
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An internal version of Astra, @OpenAI’s next major model family, solved 10 major open problems in mathematics, quantum complexity, and theoretical computer science.
We believe it will be a major step for scientific reasoning. openai.com/index/ten-advance…
I've had [what feels like] approximately every AI+bio company ask me for any talent referrals recently. It's a seller's market right now.
If you have at least a small portfolio (strong PhD or a couple years in industry) + are willing to work at least a 9-7 then you're golden.
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So Anthropic is doing drug design, and my feed is now full of jaded bio folks declaring what a terrible idea this is.
"Drug design is hard" / "don't compete with your customers" / "if they were serious they'd be acquiring Cradle, Boltz" / etc
I disagree + I am SO EXCITED.
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