🧪🤖 #CompBio + #ML for #Immunology @OmniscopeAI // prev @humantechnopole // 👨🎓 @emblebi @Cambridge_Uni @unito alumnus // 🛠️ I try to fix stuff
🇪🇺 🇮🇹 🇪🇸
Joined December 2018
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Umberto Perron retweeted
The REAL Superpower of Deep T Cell Sequencing!
We tracked #singlecell from Tumor to Blood.
We identified ICI-induced T cells.
We quantified T cell memory.
We designed personalized TCR-T therapy.
Amazing collab @OmniscopeAI @cnag_eu @SJDbarcelona_es
biorxiv.org/content/10.1101/…
Umberto Perron retweeted
Thrilled to presenting our poster at #ESMO24! Come by to explore how immune characterization and AI tools can offer critical clinical insights.
Let’s meet: eu1.hubs.ly/H0bYbp00
#ScienceIsWeAll #NoTCellLeftBehind
@myESMO
ALT Omniscope - Liquid biopsy tracking of immunotherapy-induced T cell dynamics in MSS colorectal and endometrial tumors
Umberto Perron retweeted
Join us at @myESMO Congress 2024 to learn how our technologies and AI-powered analysis can elucidate T cell landscape dynamics during immunotherapy treatment.
Let’s chat!
🤝 eu1.hubs.ly/H0c874_0
#ScienceIsWeAll #ESMO24
Umberto Perron retweeted
Join us at @myESMO Congress 2024 to learn how our technologies and AI-powered analysis can elucidate T cell landscape dynamics during immunotherapy treatment.
Let’s chat!
🤝 eu1.hubs.ly/H0bVZFK0
#ScienceIsWeAll #ESMO24
Umberto Perron retweeted
Congratulations, Nick Goldman and Mikhail Savitski!
Both EMBL group leaders have been elected as EMBO members for their research excellence. They'll be joined by Oliver Billker, a member of the @NordicEMBL Partnership, and many EMBL alumni.
embl.org/news/awards-honours…
Umberto Perron retweeted
🎉 Happy Birthday to us! 🎉
We're kicking off two incredible days packed with groundbreaking science, nostalgic moments, and a glimpse into the next 50 years of collaborative discoveries.
Follow @EMBLevents to join the celebration & stay updated! #EMBL50
It’s the first day of the EMBL 50th Anniversary Scientific Symposium ‘From atoms to ecosystems – a new era in life sciences’! 🥳
We warmly welcome our EMBL colleagues and alumni on site as well as the participants around the globe who have tuned in online. Thank you for celebrating 50 years of EMBL with us! 🌟 #EMBL50 #HappyBirthdayEMBL
let the eval games begin! [GPU goes brrrrrr]
We're incredibly excited to share ESM3 with the community -
Website: evolutionaryscale.ai
Blog: evolutionaryscale.ai/blog/es…
ESM3 Open Code: github.com/evolutionaryscale…
Notebook: colab.research.google.com/gi…
Paper: evolutionaryscale.ai/papers/…
Apply for beta API access: forge.evolutionaryscale.ai
Umberto Perron retweeted
ESM3 is out from EvolutionaryScale! 98B params (~GPT3 scale). Multimodal over sequence, structure, and function with cool design applications. Trained on variable masking ratios and decodes proteins iteratively. Some work on alignment too. Looks exciting! evolutionaryscale.ai/blog/es…
Umberto Perron retweeted
WE ARE HIRING! Please consider joining my teams @OmniscopeAI and @cnag_eu. We will open several positions for:
Computational #Biology #Immunology #Pathology
Message me if you are interested to join.
omniscope.ai/
cnag.eu/
#lifeisbetteratthebeach
Umberto Perron retweeted
Love child from Distributional Graphormer (#DiG) and #alphafold3 when? C’mon @Microsoft and @GoogleDeepMind. If @OpenAI and @Apple can team up to deliver #Her we can also have a new model that does dynamics for complexes of biomolecules. You’re almost there 🔥🔥🔥you got this.
Umberto Perron retweeted
Have long-read data and want to know what you've really sequenced, and how much of it? Reliable taxonomic labels are often scarce if the target is from a less well-explored group. VAE embeddings can tease apart different organisms in read sets:
biorxiv.org/content/10.1101/…
Umberto Perron retweeted
Now everyone customize/share protein language models for their custom task/dataset via
@GoogleColab 🤓
Paper: biorxiv.org/content/10.1101/…
Colab: colab.research.google.com/dr…
Credit: @LTEnjoy, Zhikai Li, @ChenchenHa42849, @BonnieSwt, Junjie Shan, @XibinBayesZhou, Dacheng Ma, @duguyuan
Umberto Perron retweeted
An autoantibody signature predictive (years in advance) for development of multiple sclerosis @NatureMedicine @ColinZamecnik @gavin_sowa Michael Wilson
nature.com/articles/s41591-0…
Umberto Perron retweeted
We have a 3-years MRC-funded postdoc position open within the Goldman Group at EMBL-EBI to work on pandemic-scale phylogenetic methods (see e.g. nature.com/articles/s41588-0…, nature.com/articles/s41588-0… and github.com/NicolaDM/MAPLE).
Umberto Perron retweeted
People like structure because it’s a way to pretend like you understand how a protein works.
Nobody likes looking at wiggling jiggling protein hairballs because proteins are *actually* complicated, and that makes humans sad 😭
Umberto Perron retweeted
Thank you for having us, @Google!
#ScienceIsWeAll
ALT Omniscope meets with Google
Umberto Perron retweeted
📢 Exciting news! #Omniscope joins #NVIDIA #Inception, aiming to build the world's largest immune databank. With @NVIDIA's support, we're set to accelerate AI development & advance universal #healthcare. Thrilled to innovate with industry leaders!🚀
#ScienceIsWeAll @VOmniscope
ALT Omniscope joins NVIDIA Inception