Unlocking the 🌎 of Single-Cell & Spatial Omics 🔬One cell at a time! 🔄 Building a community | Cátia Moutinho, PhD
Worldwide
Joined October 2022
- Tweets872
- Following443
- Followers1.3K
- Likes214
🎙️ Ready to learn about the new #singlecell sequencing technology from @TakaraBioUSA 👉🏻 The Shasta System?
🎧 Listen now to our latest podcast episode with Shuwen Chen & @Moutinho_C
thesinglecellworldpodcast.po…
Did you know?
👉🏻 @Illumina can now offer an end-to-end #singlecell workflow, thanks to their acquisition of @FluentBio
More details in our last blog post ✨
open.substack.com/pub/thesin…
New podcast episode just released! 🚀
@Moutinho_C with Adrian Zambrano, Customer Success Manager at @cytena about their instruments for #singlecell sequencing.
Listen now: thesinglecellworldpodcast.po…
The Single Cell World retweeted
Discover the future of 3D-omics! Our perspective aritcle explores how tissue clearing and AI with single-cell omics could revolutionize understanding of entire organs & organisms. Read the full article: nature.com/articles/s41592-0…
What if we could map every cell in the body, revealing its location and molecular identity? In this @NatureMethods perspective, we discuss the new era of 3D-omics by tissue clearing and AI, called Deep 3D Histology: rdcu.be/dNBe8 PDF: bit.ly/3WaD0QU 🧵👇🏼
The Single Cell World retweeted
1/ 23 tools to work with (single-cell) TCR/BCR-seq immune repertoire data🧵
The Single Cell World retweeted
Today we’re pleased to release the Pixelgen Single Cell Spatial Proteomics Kit, Immunology Panel 2, Human v2 (product number PXGIMM002) or MPX v2.
pixelgen.com
#MolecularPixelation #MPXv2ishere #MPXv2 #Singlecell #Spatialproteomics #PixelgenTechnologies #spatialbiology
The Single Cell World retweeted
A systematic overview of single-cell transcriptomics databases, their use cases, and limitations
frontiersin.org/journals/bio…
The Single Cell World retweeted
Open-ST: High-resolution spatial transcriptomics in 3D👏👏👏 cell.com/cell/fulltext/S0092…
Did you know that besides the well-known @BioLegend antibodies, others like @BDBiosciences , @Proteintech , or @abcam also offer antibody options for our single-cell experiments?
👇🏻 New blog post open.substack.com/pub/thesin…
Curious about @BDBiosciences 's cutting-edge #singlecell high-throughput multiomics solutions? ✨
Join us in our latest podcast episode with Hasi Patel.
Special thanks to Stefano Bonelli.
#Podcast #singlecellworld
thesinglecellworldpodcast.po…
The Single Cell World retweeted
Systematic comparison of sequencing-based spatial transcriptomic methods in @naturemethods
In summary:
“- Stereo-seq, Slide-tag, Visium shows the better capture efficiency with raw sequencing depth
- Slide-seq V2, Visium (probe), DynaSpatial gives the better capture efficiency with normalized sequencing depth.”
nature.com/articles/s41592-0…
The Single Cell World retweeted
Single-nucleus and spatial transcriptomic profiling of human temporal cortex and white matter reveals novel associations with AD pathology biorxiv.org/content/10.1101/…
The Single Cell World retweeted
New review from @coletrapnell summarizing major statistical inference methods applied to single-cell, spatial, perturbation data to study gene function in healthy and disease states @NatureRevGenet nature.com/articles/s41576-0…
The Single Cell World retweeted
So excited to announce our new method for multiplexed RNA imaging in bacterial cells: bacterial-MERFISH! A huge congratulations to the team of @AriSarfatis, Yuanyou Wang, and Nana Twumasi-Ankrah! Check out the following thread or our bioRxiv (biorxiv.org/content/10.1101/…) 1/12
The Single Cell World retweeted
🎯📢multiomics2024.org coming in hot!!! 📢🎯Get your registrations in!!! @JoeYeong @sitcancer
Speakers multiomics2024.org/speakers-…
Program: multiomics2024.org/program 🔬🧪
The Single Cell World retweeted
CellTag-multi is finally out in @NatureBiotech nature.com/articles/s41587-0…. We didn't make the cover this time, but I love what we put together with @DrawImpacts! Here's our fun vision of CellTag cell barcoding and capture across single-cell RNA-seq and ATAC-seq @kjkjindal
The June issue is live nature.com/nbt/volumes/42/is…
On our cover, Roohani et al. present GEARS, a computational method that integrates deep learning with a knowledge graph of gene–gene relationships to simulate the effects of genetic perturbations go.nature.com/3E37kEo
The Single Cell World retweeted
Systematic comparison of sequencing-based spatial transcriptomic methods | Nature Methods nature.com/articles/s41592-0…
The Single Cell World retweeted
Technology impacts the reliability of your #singlecell data. An independently conducted study reported that our Chromium Flex and 3' assays outperformed other technologies. See how the others stacked up: biorxiv.org/content/10.1101/…
🎙️ New!
Discover A4cell SPAchips, the latest tech revolutionizing #singlecell research! 🔬
👉🏻 Tiny sensors that let us 👀 inside cells in real-time. Perfect to combine with #singlecell seq tech✨
With @Moutinho_C & Irene González
thesinglecellworldpodcast.po… #A4cell