@rootomics

Welcome to ROOTomics Lab. We aim to develop climate-resilient crops by employing ROOTomics (multi-omics data from 3D root phenotyping platform using X-ray CT).

 Tsukuba, JAPAN
naro.go.jp/phenotyping/rootomics_db/en/index.html
Joined October 2018
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Congratulations, Dr. Soma! We have clarified the relationship between drought-induced growth change and gene expression in rice. We analyzed 576 sample data obtained under different droughts in the early, middle, and late stages with automatic irrigation. academic.oup.com/pcp/advance…
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Congratulations to Drs. Wei and Tanaka on publication of our paper! We have devised a method to find candidate genes of root system architecture in small size of rice accessions using a combination of GWAS, TWAS, and eGWAS. thericejournal.springeropen.…

Genome- and Transcriptome-wide Association Studies to Discover Candidate Genes for Diverse Root...

Rice - Root system architecture plays a crucial role in nutrient and water absorption during rice production. Genetic improvement of the rice root system requires elucidating its genetic control....

link.springer.com
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The iPOTs we have developed can mimic drought stress close to natural field conditions by automatic bottom irrigation. That's going to speed up the development of drought-resilient rice!!
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I am happy to announce my new review paper "Challenges to design-oriented breeding of root system architecture adapted to climate change" is now online at Breeding Science!! doi.org/10.1270/jsbbs.20118
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Today, I really enjoyed to evaluate root system of wild rice that I collected in Myanmar 15 years ago. I found unique characters from some wild accessions. I want to isolate their QTLs!!
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I am happy to publish new article about field root phenotyping. Congrats to Dr. Teramoto!!
Plant Phenomics@PPhenomics19 Oct 2020
Just #Published: A Deep Learning-Based Phenotypic Analysis of Rice Root Distribution from Field Images. #download the full #OpenAccess article here spj.sciencemag.org/journals/… @UgaZaku
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ROOTomics Lab. retweeted
Plantae@plantae_org16 Sep 2020
Plant Science Research Weekly: Root angle modifications by the DRO1 homolog improve rice yields in saline paddy fields (PNAS) @UgaZaku @rootomics buff.ly/3miWFeN Summary by Camila Ribeiro @camicribeiro86
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2020年9月2日ニュース「イネの根の張り方を制御する遺伝子発見 塩害対策に期待」 | SciencePortal scienceportal.jst.go.jp/news… #jstscn #サイエンスポータル
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🌏トピックスを更新しました 世界初、根の改良により塩害に強いイネを開発 tsukuba-sci.com/?p=8359 #塩害に強いイネ #つくばサイエンスニュース
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【注目プレスリリース】世界初、根の改良により塩害に強いイネを開発 －塩害水田向けのイネ育種に新たなアプローチ－ / 東北大学,産業技術総合研究所,農業・食品産業技術総合研究機構 research-er.jp/articles/view…

【プレスリリース】世界初、根の改良により塩害に強いイネを開発 －塩害水田向けのイネ育種に新たなアプローチ－ | 日本の研究.com

2020.08.20 農業・食品産業技術総合研究機構,東北大学,産業技術総合研究所 プレスリリース 農研機構と東北大学、産業技術総合研究所は、塩害水田で生育阻害を回避するため、根の張り方を制御する遺伝子（qSOR1、キューソルワン）を世界で初めてイネで発見しました。塩害水田では塩による直接の害だけで...

research-er.jp
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ROOTomics Lab. retweeted
Astrid Junker@AstridJunker10 Jul 2020
Our root-shoot #barley #phenotyping experiment @IPKGatersleben is running very well! 🌾📸💻 Together with @NilsStein2 and Martin Mascher we want to uncover genetic determinants of root system spreading angle! 📐📊
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Day #5: @adapt_net workshop starts with Dr @UgaZaku Principal Scientist, National Agriculture and Food Research Organization (NARO), Japan presenting abt designing genetic improvements of root system for developing of #climateresilient crops.
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The 2019 volume of TPPJ is starting with a Commentary: "NAPPN: Who We Are, Where We Are Going, and Why You Should Join Us!" by A.A. Carroll, J. Clarke, N. Fahlgren, M.A. Gehan, C.J. Lawrence-Dill and A. Lorence at dx.doi.org/10.2135/tppj2018.…
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Researchers in California have unveiled a 3D printer that creates an entire object at once, rather than building it layer by layer. Learn more in this Nature Video.
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LEADER (Leaf Elemental Accumulation for Deep Roots) uses handheld X-Ray fluorescence tech from @bruker to identify deep #root cultivars using soil elemental gradients to determine root depth. #XRF
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ROOTomics Lab. retweeted
Akifumi Sugiyama@a_sugiyama6 Feb 2019
田畑先生のインタビュー→　植物ゲノム解析で世界をリードする日本の研究所で訊く「作物の未来」 gendai.ismedia.jp/articles/-… #ブルーバックス
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Basic principles of root growth - Version 2.35
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Saving time and money in seed testing with the Germination Scanalyzer: lemnatec.com/building-the-ne…
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#WorldSoilDay Succulent plants that thrive in arid environments, such as this cactus (Rebutia flavistyla) from the Andes, may hold the key to understanding how plant root systems can adapt to soils with a very low moisture content.
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Our RootRobot will be a tractor driven, automatic device that will excavate and clean root crowns from the field. An imaging station will be used to capture 3600 images of each root crown for analysis. Goodbye shovelomics, hello RootRobot!
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