
๐ฎ๐ณ #Bioinformatics #MultiOmics #NetBio ๐ฅ๐งฌ|๐จโ๐#PhDLife @univ_paris_cite ๐ซ๐ท @MLFPM_ITN ๐ช๐บ| #OpenScience #MachineLearning enthu | @iscbsc Chair
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Pradeep Eranti | @[email protected] retweeted
3 weeks from now ! #InBixiCOBLET2026 | Inbix.org | Inbix2026. @Bobek_Soham97 #bioinformatics #India #Genomics
๐ฃ Excited about todayโs community meeting!
Itโs a great opportunity to connect with our global community @iscbsc, listen, share ideas, and discuss how we can better support our community. ๐๐ค๐
Hope to see you there!
๐ฃ Student CouncilโWide Meeting | August 17, 2026
Hi everyone! ๐
The ISCB Student Council Executive Team would like to invite the entire Student Council (SC) community to a SCโwide meeting on Monday, August 17, 2026, at 9:00 AM GMT-4.
๐ This is an opportunity for our entire community to come together, connect with each other, and share your thoughts with the Executive Team.
๐ฌ Have questions or concerns? We want to hear them!
A registration form will be shared shortly where everyone will have the opportunity to submit questions, raise concerns, or share ideas. The Executive Team (ET) will address these questions during the meeting.
๐ค Most importantly, the ET would love to hear from you and better understand how we can make the Student Council an even more thriving, connected, and supportive communityโand how we can serve you better.
SC is powered by each of you who do the heavy lifting and groundwork that keeps our community moving forward. We truly value all the time, energy, and enthusiasm you bring to the SC, and we want to make sure the Executive Team is supporting you in the best way possible.
โจ We hope to see everyone there! Come connect, ask questions, share ideas, and help shape the future of our community.
๐
Date: Monday, August 17, 2026
๐ Time: 9:00 AM GMT-4
๐ Registration form: docs.google.com/forms/d/e/1Fโฆ
#compbio #iscbsc #bioinformatics #computationalbiology
Pradeep Eranti | @[email protected] retweeted
๐ Just published in Bioinformatics Advances: "Bioinformatics in Espaรฑol: Expanding open, diverse, and collaborative science through SEH2Bioinfo"ย
Find it here: doi.org/10.1093/bioadv/vbag1โฆย
Authors include: @Carlalpf91, @NPalopoli, @JALF4170, @CleidyOsorio, @emesquinas, @pradeeperanti, @ycuestaastroz, @GonzaParra_
Pradeep Eranti | @[email protected] retweeted
๐ ๐๐ฆ๐ฉ๐๐๐ญ ๐จ๐ ๐๐๐๐๐-๐๐ ๐จ๐ง ๐๐จ๐ฆ๐ฉ๐ฎ๐ญ๐๐ญ๐ข๐จ๐ง๐๐ฅ ๐๐ข๐จ๐ฅ๐จ๐ ๐ฒ ๐๐๐ซ๐ฅ๐ฒ ๐๐๐ซ๐๐๐ซ ๐๐๐ฌ๐๐๐ซ๐๐ก๐๐ซ๐ฌ (#๐๐๐๐ฌ)
It all started with one good chat with @GonzaParra_ , Sayane Shome et al., that planted an idea to explore: ๐ฉ๐ฐ๐ธ ๐ธ๐ข๐ด ๐ต๐ฉ๐ฆ ๐ฑ๐ข๐ฏ๐ฅ๐ฆ๐ฎ๐ช๐ค ๐ต๐ณ๐ถ๐ญ๐บ ๐ข๐ง๐ง๐ฆ๐ค๐ต๐ช๐ฏ๐จ ๐ค๐ฐ๐ฎ๐ฑ๐ถ๐ต๐ข๐ต๐ช๐ฐ๐ฏ๐ข๐ญ ๐ฃ๐ช๐ฐ๐ญ๐ฐ๐จ๐บ ๐ฆ๐ข๐ณ๐ญ๐บ-๐ค๐ข๐ณ๐ฆ๐ฆ๐ณ ๐ณ๐ฆ๐ด๐ฆ๐ข๐ณ๐ค๐ฉ๐ฆ๐ณ๐ด ๐ธ๐ฉ๐ฐ ๐ข๐ณ๐ฆ ๐ฏ๐ฐ๐ต ๐ธ๐ฐ๐ณ๐ฌ๐ช๐ฏ๐จ ๐ช๐ฏ ๐ธ๐ฆ๐ต-๐ญ๐ข๐ฃ๐ด?
Two years of participants' input at the virtual #ISMB #SCS conferences, particularly responses from Early Career Researchers (#ECRs), rigorousย analysis by @i_am_kilpatrick , Sayane, @pradeeperanti, @meghegde97 , followed by a thorough review by @PLOS reviewers, our study is finally out in #PLOSComputationalBiology #PLOS
Our retrospective study analyses the experiences of earlyโcareer computational biology researchers worldwide during the 2020โ2021
#COVID19lockdowns.
๐งช ๐๐๐ฒ ๐ข๐ง๐ฌ๐ข๐ ๐ก๐ญ๐ฌ:
โข Productivity plummeted: 81โ85โฏ% of ECRs reported being less productive than before lockdowns. Only ~4โฏ% felt they were more productive.
โข Hidden burdens: Female researchers and those juggling childcare reported the greatest losses and stress.
โข Mental health gaps: Over 40โฏ% of institutions offered no #mentalโhealth support in 2020, rising to 56โฏ% in 2021.
โข Financial strains: Many #ECRs lost grant funding or incomeโa problem often overlooked for #dryโlab work.
โข Not all bad news: Yet the shift to remote and hybrid work also brought unexpected positives. Many respondents advocated for continuing flexible workโfromโhome policies, and the community discovered that virtual conferences can broaden participation. Our findings call attention to the need for better mentalโhealth resources and financial support, even in dryโlab disciplines.
๐ ๐๐๐๐ ๐ญ๐ก๐ ๐๐ฎ๐ฅ๐ฅ ๐ฉ๐๐ฉ๐๐ซ ๐ก๐๐ซ๐: ๐ journals.plos.org/ploscompbiโฆ
Grateful to have such a fantastic contribution fromย @i_am_kilpatrick ย and the team, includingย ISCB Student Councilย ex and present leaders (@iscbsc ), andย ISCB (@iscb ) - International Society for Computational Biologyย team, for turning a casual conversation into this evidenceโbased contribution to the #compbio community. We hope this is a good read for anyone seeking to understand how COVIDโ19 impacted not just wetโlab scientists but researchers across computational biology and beyond.
๐ฉโ๐ฌ๐จโ๐ป Thanks to all survey participants and to the #ISMB, #ECCB and #SCS community for supporting this initiative.
#ComputationalBiology #Bioinformatics #DryLab #ECR #COVID19 #MentalHealth #HybridWork #Inclusion #ScienceCommunity #ECRs #WorkingLifeduringPandemic
Replying to @iscb
@iscb votes for the Vice President and the Secretary positions.
Read the candidate statements, make an informed decision, and help shape the future of our community through thoughtful participation. Every vote matters. #Democracy!
1/2
I support @danfdeblasio's candidacy for Secretary position, who has served in a leadership role and continues to champion @iscbsc. He has demonstrated dedication, experience, and a genuine investment in our #community. I believe his leadership will continue to benefit @iscb.
2/2
Pradeep Eranti | @[email protected] retweeted
๐ Just published in Bioinformatics Advances: "The 15th ISCB Student Wikipedia Competition: Past, present and future perspectives"ย
Find the full perspective piece at doi.org/10.1093/bioadv/vbag1โฆ
Authors include: @ISCBWikiTeam, @danfdeblasio, @i_am_kilpatrick, @pradeeperanti, @LonnieRWelch, @propicee
Pradeep Eranti | @[email protected] retweeted
I don't think scientists should work for anyone else. They should work for discovery and for their own curiosity.
โ Maria Leptin, ERC President @mleptin
(From the episode of the Night Science Podcast coming out next week @nightsciencepod)
Pradeep Eranti | @[email protected] retweeted
Sample-level modeling of single-cell data at scale with tinydenseR biorxiv.org/content/10.1101/โฆ #biorxiv_bioinfo
This is bad ... VERY bad news.
It is devastating to see that @NLM_NIH @NCBI PubMed, the most comprehensive database of biomedical literature, will not be fully functional pubmed.ncbi.nlm.nih.gov ๐๐พ
๐ขEurope PMC (europepmc.org/)
Pradeep Eranti | @[email protected] retweeted
Bioinformatics Advances is looking for new #AssociateEditors to join the editorial board!
Details about the position and instructions on how to apply can be found here: academic.oup.com/bioinformatโฆ
Pradeep Eranti | @[email protected] retweeted
1/ Everything that could go wrong in paper publishingโฆ did.
A story of patience, absurdity, and persistence ๐ 1min
From Alfonso Valenciaโs lab and a very stubborn PhD student (me).
Pradeep Eranti | @[email protected] retweeted
I wrote a piece about how people are actually using AI tools like ChatGPT. It summarizes over half a dozen recent studies using large real usage logs including studies from Anthropic and Microsoft.
link in the first comment
Pradeep Eranti | @[email protected] retweeted
A recent distress call: a student has taken about โน70L ($80K) debt at 12% to get a master's degree in a small college in the US.
The problem: the job scene in IT is bad, especially so for foreign students and payments on the loan are starting soon.
I don't know what we could do in this situation because we have not been hiring much as we transform ourselves for the AI era. That caution in hiring is also because we have a policy of not resorting to lay-offs.
I urge students and parents to be cautious in borrowing heavily to pursue degrees abroad. Borrowing heavily to pursue degrees in India is unwise too.
I strongly believe we should not trap young people in debt in the name of education. The only smart course is for prospective employers to fund training programs and for the industry to broadly accept such alternative credentials rather than ask for formal degrees.
The best investment we make as a company is in training and skill development. I hope companies do this widely so we don't strand young people in debt.
๐คฏ
Replying to @PrathameshD_8
Authorship isn't given to coders but only to researchers who came up with the model / architecture. The PhD student involved in the research would have been the first author and that's to be expected and correct.
Architect of a house doesn't give credit to the masons or contractors for the architecture! But they can (and should) acknowledge them as a courtesy.
Pradeep Eranti | @[email protected] retweeted
An excellent scientific event on "Decoding Life: Computational and Biological Frontiers" at @KingstonECE with @ISCB_RSG_UK . If you are a PhD student/ Post-Doc, join us to listen to inspiring talks from scientists from across the globe! @nselem35 @meghegde97
Pradeep Eranti | @[email protected] retweeted
@iscbsc is coming to #ISMB2025 in Liverpool! ๐ฌ๐ง
Ready for Liverpool? We canโt wait to see you! Hereโs where youโll find us:
1๏ธโฃ SCS2025 โ Our flagship Student Council Symposium:
๐ iscb.org/scs2025/home
2๏ธโฃ Our Booth โ Daily in the exhibitor space (Hall 2, Lower Level)
3๏ธโฃ Come Together Networking Event โ July 23, 7 PM at Punch Tarmeyโs. Come at our table!๐ป
We are so excited to meet you! ๐ฌ #ISMB2025 #SCS2025 #iscbsc #networking #connect #bioinformatics #leadership
Pradeep Eranti | @[email protected] retweeted
Preprinting means sharing an early version of your research, generally before journal-organised review. Many organisations are starting to offer and recognise peer-reviewed preprints.
But how can preprinting benefit you? Check out our 5 Fs of preprinting.elifesciences.org/inside-eliโฆ
Pradeep Eranti | @[email protected] retweeted
Are you attending ECCB/ISMB this year? I'm looking for candidates to apply to Marie Curie/EMBO postdoc fellowships to join our group & study how local frustration shapes protein biophysical properties at evolutionary timescales. If interested let's grab a coffee in Liverpool ๐๐ค
Pradeep Eranti | @[email protected] retweeted
GeneRanger is a web-server application that provides access to processed data about the expression of human genes and proteins across human cell types, tissues, and cell lines from several atlases. generanger.maayanlab.cloud/eโฆ
Pradeep Eranti | @[email protected] retweeted
This week's genome editing triumph is a big deal.
Here's why
erictopol.substack.com/p/theโฆ

































