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Our preprint for a complete workflow for plant genome assembly is out
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A great pleasure for me and Angel Angelov (github.com/angelovangel) giving guest lectures for @Mo_Li_KAUST's Introduction to Nanopore Sequencing course @nanopore @KAUSTBCL @kaust_corelabs
Patrick Driguez retweeted
Exodus of young life scientists is shaking up academia
“The tipping point is coming” statnews.com/2022/11/10/tipp…
Very proud to be involved with this project!
We assembled the genome of an individual from Saudi Arabia and make the assembly and sequencing data freely available; the genome is almost complete (compared to CHM13) and fully annotated; great collaboration with @MalakAbed @kaust_corelabs @CBRC_KAUST
biorxiv.org/content/10.1101/…
Patrick Driguez retweeted
I feel like i've unlocked a science achievement by getting our work featured on @IFLScience . ✅🥳
Viking poop is helping to tell the story of humankind’s long and difficult relationship with one of the most prolific parasitic worms found in the world – the whipworm.
iflscience.com/ancient-vikin…
Installed a Sequel IIe next to our Sequel II! Lots of high quality long reads coming up! @PACBIO @KAUSTBCL @KaustResearch @kaust_corelabs
At the Bioscience Core Lab booth at #cbrccobf2022 Metagenomics Conference #KAUST
Patrick Driguez retweeted
Welcome to our newest Center leader, Dr Francesca Short. Fran is interested in the regulatory networks that govern virulence and antimicrobial resistance in gram-negative pathogens & molecular mechanisms of antimicrobial biocides. Fran is helping drive our OneHealth agenda!
Patrick Driguez retweeted
At the upcoming @NanoporeConf community meetings I will present a new, @nanopore only lettuce reference genome. Highly contiguous and highly accurate. nanoporetech.com/resource-ce…
Patrick Driguez retweeted
The genome sequence of the Australian filarial nematode, Cercopithifilaria.... McCann K et al., published by @WellcomeOpenRes, wellcomeopenresearch.org/art…
A nice outcome from a side project, a long long time ago in the @lab_grant at @PAM_latrobe . Very happy for @Kirsty_m_McCann 🙌
Patrick Driguez retweeted
Looking forward to run these brand new @nanopore R10.4 cells @KeyGeneInfo Our aim is to increase accuracy further using trained models and increase the number of duplex reads. Q20+ #ngs #longreads #crops #breeding
Patrick Driguez retweeted
Excited to see our paper out, and much improved from the pre-print version - we find that the “real job” of AmvA, a disinfectant resistance efflux pump from A. baumannii, is transport of polyamine metabolites. nature.com/articles/s42003-0…
Patrick Driguez retweeted
gggenomes - an R package for comparative genomics, which extends the ggplot2 by adding dedicated plot functions for genes, syntenic regions, and verbs to manipulate the plot.
github.com/thackl/gggenomes
#rstats #genomics #DataVisualization #ggplot2
Patrick Driguez retweeted
Less than one week left (closes 19th September) to apply for the postdoctoral researcher position in my group to develop and lead single-cell genomics for helminth parasites.
Will suit someone with good molecular biology skills with an interest in bioinformatics.
I am excited to announce I am looking for a postdoctoral fellow to develop and lead single-cell genomics on helminth parasites for the next 3 yrs. Will be a combination of wet and dry lab. Please RT and share! jobs.sanger.ac.uk/vacancy/po…
Patrick Driguez retweeted
I am excited to announce I am looking for a postdoctoral fellow to develop and lead single-cell genomics on helminth parasites for the next 3 yrs. Will be a combination of wet and dry lab. Please RT and share! jobs.sanger.ac.uk/vacancy/po…
Amazing work. A hugely improved version of the Schistosoma mansoni genome!
Now on biorxiv: biorxiv.org/content/10.1101/… A huge effort that started in 2014. The genome came a long way in the past 3 yrs and I want to thank all my co-authors for their huge contributions. @sangerinstitute @parasitegenomes @WBParaSite
Patrick Driguez retweeted
Now on biorxiv: biorxiv.org/content/10.1101/… A huge effort that started in 2014. The genome came a long way in the past 3 yrs and I want to thank all my co-authors for their huge contributions. @sangerinstitute @parasitegenomes @WBParaSite
