Team Science. No Borders. Bring It On.

Joined March 2021
We enable the community to query and visualise our results interactively through our webserver: omicscience.org/apps/protdet…
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Our data can enhance interpretation of the ever-increasing number protein-disease associations. E.g. proteins associated with incident #PAD are enriched in those casually determined by #smoking status.
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We performed #Mendelian randomization to identify major biological influences with putative causal effects on plasma protein levels.
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#Proteins influenced by one or few strong factors can serve as biomarkers of health-related changes and exposures, e.g. #SOST for bone mass, #CTHRC1 for #lipid-lowering medications.
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Liver and kidney function, inflammation and smoking status have wide-spread effects on the proteome (influencing >3k proteins). Anthropometric factors influenced a fewer number of proteins but had a stronger influence.
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Joint genetic and biological factors explained >10% of variation for over a third of proteins. #Plasma proteins cluster into groups according to their major biological explanatory factor. Over a third of proteins were best explained by #modifiable factors.
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#Proteomics capture thousands of plasma proteins. Most are not secreted, their origin and role are unclear. We characterised the joint contribution of >60 biological, #genetic and technical influences on 5k #plasma proteins in the Fenland study.
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Want to get a summary of our paper and of the implications of our research? Check out our research briefing at @NatureMedicine nature.com/articles/s41591-0…
Precision medicine requires finding people at a high risk of disease. We used >3,000 proteins to develop sparse models for prediction of future risk of 218 diseases using #EHRs and #MachineLearning in @uk_biobank. nature.com/articles/s41591-0… rdcu.be/dOxQQ
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We make our results available through our webserver (omicscience.org/apps/protpre…) to visualise the potential benefit of #proteomic screening in a Bayesian framework.
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Severe diseases with poor prognosis among the best predicted: dilated cardiomyopathy, pulmonary fibrosis, #MultipleMyeloma , non-hodgkin lymphoma.
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We find proteins predictive across more than 1 clinical specialty and specific disease predictors e.g. BCMA (TNFRSF17) for multiple myeloma, a target of multiple myeloma treatments.
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For 52 diseases these performed better than standard clinical blood tests. e.g. those who will develop #MultipleMyeloma >6 times more likely to test with a high proteomic risk.
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For 67 diseases, 5 to 20 proteins improved prediction over clinical risk factors up to 10 years before onset.
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Precision medicine requires finding people at a high risk of disease. We used >3,000 proteins to develop sparse models for prediction of future risk of 218 diseases using #EHRs and #MachineLearning in @uk_biobank. nature.com/articles/s41591-0… rdcu.be/dOxQQ
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We are so honoured for this recognition of our science. Go team!
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