https://xitter.cf/t.co/fattdC7kwd postdoc @fredhutch @uwproteindesign | made via @hprscholars @pennbioeng @berkeleybioe

Seattle, Washington
Joined September 2019
My poster on flower bioengineering at the #AIEBaB26 conference in Bristol last week 🌹 🧬 ✨
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BREAKING NEWS The 2025 #NobelPrize in Physiology or Medicine has been awarded to Mary E. Brunkow, Fred Ramsdell and Shimon Sakaguchi “for their discoveries concerning peripheral immune tolerance.”
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In the genomics community, we have focused pretty heavily on achieving state-of-the-art predictive performance. While undoubtedly important, how we *use* these models after training is potentially even more important. tangermeme v1.0.0 is out now. Hope you find it useful!
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Introducing the 1,000 Flower Collection 🧬🌹 I’m creating 1,000 genetically designed flowers each crafted with new colors, patterns, and shapes. Here’s how I’m making it happen…  and how you can join me on this journey 🧵(1/7)
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ecDNA are rogue genetic material that amplify genes, contribute to treatment resistance and drive genomic heterogeneity. We report on the Origins and impact of extrachromosomal DNA today in @Nature nature.com/articles/s41586-0…
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David Mai retweeted
Our new paper on epigenome editing is out! We mapped which effector domains regulate transcription across genomic, cell type and DNA-binding domain contexts. Then we built new gene repressor and activator tools with improved efficiency & deliverability nature.com/articles/s41587-0…
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BREAKING NEWS The 2024 #NobelPrize in Literature is awarded to the South Korean author Han Kang “for her intense poetic prose that confronts historical traumas and exposes the fragility of human life.”
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BREAKING NEWS The Royal Swedish Academy of Sciences has decided to award the 2024 #NobelPrize in Chemistry with one half to David Baker “for computational protein design” and the other half jointly to Demis Hassabis and John M. Jumper “for protein structure prediction.”
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BREAKING NEWS The Royal Swedish Academy of Sciences has decided to award the 2024 #NobelPrize in Physics to John J. Hopfield and Geoffrey E. Hinton “for foundational discoveries and inventions that enable machine learning with artificial neural networks.”
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BREAKING NEWS The 2024 #NobelPrize in Physiology or Medicine has been awarded to Victor Ambros and Gary Ruvkun for the discovery of microRNA and its role in post-transcriptional gene regulation.
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My PhD work is out! How do mothers balance tending to their own needs, such as eating, and taking care of their offspring? We examined the link between feeding and parenting neural circuits and how they are modulated postpartum in mice 🧵 (1/9) PREPRINT: biorxiv.org/content/10.1101/…
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For 25 years, the Toll-like Receptor pathway was considered a series of distinct protein complexes that drive inflammation. Today, we report that the entire pathway, from receptor to transcription factor, is executed from within one complex—the myddosome. nature.com/articles/s41586-0…
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Our work on bridge recombination is out in @Nature today. We are especially excited to share our structural work in collaboration with @hnisimasu. We show that this enzyme makes and breaks a Holliday junction, using more (!) RNA-DNA base-pairing to drive the reaction forward 🧵
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Our 2 bridge RNA papers are finally published in @Nature! Check out the incredible CryoEM structures, they're truly beautiful. A years-long rollercoaster ride, it's hard for me to imagine a more exciting project than this. Thank you to @ntperry13, @pdhsu, and our amazing team!
What if we could universally recombine, insert, delete, or invert any two pieces of DNA? In back-to-back @Nature papers, we report the discovery of bridge RNAs and 3 atomic structures of the first natural RNA-guided recombinase - a new mechanism for programmable genome design
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David Mai retweeted
Happy to announce that two papers on the bridge RNA-guided IS110 recombinase have been published in Nature! Many thanks for the wonderful collaboration with @pdhsu. nature.com/articles/s41586-0… nature.com/articles/s41586-0…
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Sharing my first 1st author paper, now published in Science! For my PhD I engineered CHARM, a compact, enzyme-free epigenetic editor which can be delivered via AAV vector to reach the brain. This work was done in @JswLab with @TessaBertozzi and @ElaineWu0 science.org/doi/10.1126/scie…
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Read below about our exciting work that is now out @Nature led by @jcole_garcia of @UCSF @parkerici @GladstoneInst and @jay_daniels1 of @NUFeinbergMed. This is one of the most gratifying collaborations with @jaehyukchoimd -- tinyurl.com/nhdvhm6v
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Excited to share - EcORep! Now you can simply electroporate a PCR product into E. coli and let the linear DNA replicate orthogonally in the cell. EcORep can be used to evolve proteins rapidly and continuously! science.org/doi/10.1126/scie…
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We are thrilled to present a new #enzyme to the world, the first shown to break the man-made carbon-silicon bonds in #siloxanes, which are persistent in the environment. caltech.edu/about/news/teach…
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