@isatools
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#OpenSource tools to collect, describe & publish life, environmental, biomedical experiments with community standards; part of @ELIXIREurope enabling #FAIRdata
University of Oxford, UK
Joined May 2010
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And check out our poster:@ELIXIREurope lands on MARS! With #ISAformats at its core! Details at ➡️ github.com/elixir-europe/MAR… #interoperability #multiomics #omics #FAIRdata
We’re in Thessaloniki 🇬🇷 preparing for the 2025 ELIXIR All Hands meeting! We look forward to seeing you all soon.🎉
👉 Don’t forget to check the programme and decide which workshops or mini-symposium you want to attend:
elixir-events.eventscase.com…
#ELIXIR25
Excellent community practice on use of ISA metadata schema to capture metadata about #omics experiments in a hierarchical manner, in which the different layers can be integrated and connected within one project! ISA is also an @ELIXIREurope @ElixirNodeUk resource for #FAIRdata ⬇️
It’s time for our team to disconnect for the winter break ❄️ We're back in early Jan. Until then responses may be delayed and all support is on a best effort basis as our staff travel to visit friends and family!!
@OxfordeResearch @oxengsci
Great presentation by Bert Droesbeke @ELIXIRnodeBE on behalf of @ELIXIREurope #MARS brokering initiative 4 submitting #multiomics life sciences studies to multiple repositories - already used for many EBI
databases and more are joining in ➡️ github.com/elixir-europe/MAR… #RDAPlenary
Bert Droesbeke @ELIXIRnodeBE on #MARS the #ISAJSON based #multiomics metadata carrier and brokering initiative part of @ElixirNodeUk and @ELIXIREurope
➡️ github.com/elixir-europe/MAR… @isatools #RDAPlenary #metadatastandard
The @ELIXIREurope #MARS #ISAJSON poster presented by Sveinung at #RDAPlenary and will features on Thursday in the #multiomics WG session ➡️ github.com/elixir-europe/MAR…
We are also present at the @ELIXIREurope #BioHackEU24 with the #MARS project “Multi-omics Adapter for Repository Submissions” a #DataBrokering initiative with #ISAJSON as #metadata carrier ⬇️ #EOSC #ELIXIR #interoperability #FAIRdata
🎉 We’re in Barcelona getting ready for BioHackathon 2024! #BioHackEU24
⚠️ Please follow the travel directives and stay safe.
The project presentation will be in hybrid mode at 13:30 CET. Look forward to seeing you online and hacking on projects together 🧑💻 in the next few days.
Note the central presence and role of #ISA in this ⬇️ #RDA group, and at upcoming @resdatall plenary there will be a presentation of the use of #ISAJSON in the @ELIXIREurope project for a common #multiomics #metadata carrier 😃
👩💻👨💻Seeking developers!
The Multi-Omics Metadata Standards Working Group needs a software and web developer to develop their Landscape Dashboard into an interactive, web-based tool.
Interested? Learn more and apply: ow.ly/NFKb50TQstv @lnanderscience @FAIRsharing_org
ISA Metadata Toolkit retweeted
📣Call for Experts
The Multi-Omics Metadata Standards Working Group is seeking a software and web developer to develop their Landscape Dashboard into an interactive, web-based tool.
Sounds like you? Learn more and apply: ow.ly/NFKb50TQstv @lnanderscience @FAIRsharing_org
It's time for our team to disconnect, log out of Teams, Zoom, Slacks and emails and have a well deserved holiday break. Our usual and sincere big THANK-YOU to all our collaborators and friends! Back in September!
ISA Metadata Toolkit retweeted
Highlighting @ralf_weber of @unibirmingham on #metabolomics & #multiomics data integration; and @Phil_at_OeRC of @OxfordeResearch on #MetadataManager tool & #FAIRdata with @isatools, testing #DataBrokering to EBI databases with #ISAJSON (github.com/elixir-europe/bio…) #PrecisionToxACM
ISA Metadata Toolkit retweeted
Philippe Rocca-Serra on latest advances with @isatools and the planned #BioHackathon project using #ISAJSON for #multiomics data brokering #ELIXIR24
ISA Metadata Toolkit retweeted
And Sebastian Beier #ELIXIR Germany Node flags the COPO system as another #ISAJSON compliant system - yeah it will be a great BioHackathon project and hopefully we will soon shelf #multiomics brokering challenge as “job done”! #ELIXIR24 @isatools
ISA Metadata Toolkit retweeted
This #Biohackathon2024 “MARS multiomics brokering project” with @isatools and many #ISAJSON producing tools and platforms gets also highlighted by Flora D’Anna @ELIXIRnodeBE in the #ELIXIRDataPlatform session at #ELIXIR24
Well done to all selected projectl!! Spotlight on the “Project 23: MARS: Multi-omics Adapter for Repository Submissions, preparing for launch” by Bert Droesbeke, Philippe Rocca-Serra @Phil_at_OeRC with #ISAJSON and more at github.com/elixir-europe/bio… #ELIXIR24
Well done to all selected projectl!! Spotlight on the “Project 23: MARS: Multi-omics Adapter for Repository Submissions, preparing for launch” by Bert Droesbeke, Philippe Rocca-Serra @Phil_at_OeRC with #ISAJSON and more at github.com/elixir-europe/bio… #ELIXIR24
📣 The BioHackathon Programme Committee has selected 32 projects out of 62 eligible submitted projects!
Check the website for the selected projects 👉 biohackathon-europe.org/proj…
Found a project you’re interested in already? Registration will open in late June, stay tuned with us!
ISA Metadata Toolkit retweeted
Yeah! Well done to al selected projectl!! Spotlight on “Project 23: MARS: Multi-omics Adapter for Repository Submissions, preparing for launch” by Bert Droesbeke, Philippe Rocca-Serra @Phil_at_OeRC with @isatools and more at github.com/elixir-europe/bio…! #ELIXIR24
ISA Metadata Toolkit retweeted
Our @Phil_at_OeRC is at #swat4ls to present tomorrow the @ELIXIREurope #FAIRcookbook from an industry prospective. Also great to see community work progresses around the widely adopted @isatools with mapping to #DCAT and #FHIR standard models 😜 #omics #interoperability #FAIRdata
ISA Metadata Toolkit retweeted
Our @OxfordeResearch #DataReadiness funded under the @ELIXIREurope #Interoperability platform for activities encompassing @isatools @FAIRsharing_org and the #FAIRcookbook to enable #FAIRdata ⬇️
🙌 ELIXIR has launched 8 projects (Commissioned Services) addressing the scientific and technological ambitions 🔬 of its new Scientific Programme for 2024 to 2028 and connecting experts in ELIXIR Nodes 🌍.
Read the news 👉 elixir-europe.org/news/new-p…
ISA Metadata Toolkit retweeted
Great example published @GigaScience on the use of @isatools and #ROcrate to achieve #FAIRdata ➡️ doi.org/10.1093/gigascience/… #omics #reproducibility #opendata - @ELIXIREurope @ElixirNodeUk
It's time for our team to have a well deserved winter ❄️break. We couldn't leave though without first giving a usual big THANK-YOU to all our users, collaborators and friends, and we will see you in the new year!!!
ISA Metadata Toolkit retweeted
Thank to @Phil_at_OeRC for contributing to @isatools and related #metadata #FAIRdata related activities at the @ELIXIREurope #BioHackEU23 !! ⬇️
🎉Thank you all for joining #BioHackEU23! A special thanks to our online and overseas participants 🙌 staying up late hacking through different projects with us.
👏It has been a great week!! And we look forward to seeing you next year for #BioHackEU24!🥳
