Hiroyuki Hakozaki retweeted
AI 4D Cell Biology!
Watch mitochondria reveal their hidden phenotypes! We built MitoSpace, a self-supervised model trained without labels on terabytes of 4D lattice light-sheet movies of single cells. It learns representations that outperform predefined features, predict membrane potential from 4D form alone (R²=0.91), and generalize zero-shot to unseen drugs and human lung organoids.
🎉 Now published in @CellCellPress!
With @DrvAgwl @ZacharyWang379 @ecarkfeld @andremodolo4 @Parth_LFC @hhako2 @GCMcMahon
📄 Paper: cell.com/cell/fulltext/S0092…
🔬 Explorer: mitospace.ai
💻 Code: github.com/schoeneberglab/Mi…
🤗 Model: huggingface.co/schoenebergla…
#AI4DCellBiology #cellbiology #microscopy #LLSM #latticelightsheet #mitochondria #deeplearning #phenomics
Hiroyuki Hakozaki retweeted
Watch a virtual cell come to life!
We built whole-cell, particle-based digital twins of living cells, reconstructed directly from 4D lattice light-sheet microscopy.
🎉 Now published in @CellCellPress!
With @ecarkfeld @ZacharyWang379 @hhako2
📄 Paper: cell.com/cell/fulltext/S0092…
💻 Code: github.com/schoeneberglab/re…
#cellbiology #microscopy #LLSM #latticelightsheet #simulation #mitochondria #microtubules
Hiroyuki Hakozaki retweeted
Super excited to introduce MitoSpace: The first mitochondrial phenotypic atlas created using self-supervised deep learning! @Parth_LFC @ZacharyWang379 @AroraMehul1 @hhako2
biorxiv.org/content/10.1101/… #MachineLearning #deeplearning #ai #drugdiscovery #microscopy #mitochondria
Hiroyuki Hakozaki retweeted
Like to grow brains? Our lab is hiring a #postdoc in #4D #mitochondria dynamics in Brain #organoids 🧠🔬🎉! Please spread the word and apply here: forms.gle/2tBGXvt4TNySwToF9
Hiroyuki Hakozaki retweeted
Very excited to introduce MitoTNT: Mitochondrial Temporal Network Tracking for 4D live-cell fluorescence microscopy data.
Excellent work @ZacharyWang379, @Parth_LFC, @hhako2 et al!
biorxiv.org/cgi/content/shor…
#biorxiv_cellbio #biorxiv #latticelightsheet #llsm #lls #microscopy

