Bioinformatics, machine learning, and omics. Currently Director of Precision Medicine and Computational Biology Data Science at @sanofi
Cambridge, MA
Joined April 2013
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Franck Rapaport retweeted
Thank you for everyone's kind words for this piece, here is an accessible link for those who had requested one
urldefense.proofpoint.com/v2…
Franck Rapaport retweeted
In ep.444 of #AIinAction, @frapaport, Director of #PrecisionMedicine, #ComputationalBiology and #DataScience at @sanofi discusses the impact they are making within precision medicine, the potential impact in #medicine and more
🎧 Listen now 👇👇👇
bit.ly/42O8U7M
Franck Rapaport retweeted
1/ We are excited to share some news about human IRF1, which surprisingly turns out to be the key transcription factor downstream from IFN-gamma and STAT1 in macrophages (sciencedirect.com/science/ar…).
The PMCB Data Science lab at Sanofi applies machine learning to impact precision medicine research.
We are looking for a talented Principal Data Scientist, who is interested and experienced in both AI and translational research.
linkedin.com/jobs/view/34058…
The Precision Medicine and Computational Biology Data Science lab at Sanofi is looking for a Principal Data Scientist.
sanofi.wd3.myworkdayjobs.com…
Franck Rapaport retweeted
Are you interested in primary immunodeficiencies (PIDs) and T cell signaling? If yes, our new paper about human CARMIL2 deficiency published today in @JExpMed is for you. bit.ly/3FstJeS
Franck Rapaport retweeted
@MSKLibrary feature: Integrative analysis ids older ♀️-linked #AML patient group w/better risk in @eaonc #ClinicalTrial dx.doi.org/10.1038/s41408-02… @frapaport @KennethSeier @yases14 @DrDuaneHassane @TimourBaslan @haematognomist @mason_lab @MartinTallman @gonen_mithat @rosslevinemd
Another great idea by @anshulkundaje
I think this is just the right time for the brilliant forward looking folks behind @biorxivpreprint to set up something equivalent to Twitter for the academic community focused on science and preprint comm & discussions. (Eg. Maybe building on Mastodon). 1/
Franck Rapaport retweeted
This is rubbish. Shame on @sapinker for spreading this misogyny. A 🧵...
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Franck Rapaport retweeted
Adam works amazingly well for both ML and geometry problems. But when parameters are geometric, Adam is not rotation-equivariant and leads to artifacts.
We propose a fix with "VectorAdam for Rotation Equivariant Geometry Optimization" w/ @nmwsharp @_AlecJacobson #NeurIPS22 (1/7)
Franck Rapaport retweeted
scGSEA / scMAP: Single-cell gene set enrichment analysis and transfer learning for functional annotation of scRNA-seq data biorxiv.org/content/10.1101/…
One more paper from my previous life as academic researcher.
nature.com/articles/s41408-0…
We performed whole exome sequencing on 210 AML patients over the age of 60 (aged AML or aAML), an age group associated with worse prognosis but often underrepresented in study cohorts.
1/7
This is a many-author study and I want to thank all the collaborators
Kenneth Seier
@yases14
@DrDuaneHassane
@TimourBaslan
@dr_gildea
Samuel Haddox
Tak Lee
@haematognomist
Caroline Sheridan
Alexis Thurmond
Ling Wang
Martin Carroll
Larry D. Cripe
Hugo Fernandez
…
6/7
@mason_lab
Elisabeth Paietta
@groboz
Zhuoxin Sun
@MartinTallman
Yanming Zhang
@gonen_mithat
@rosslevinemd
@LabMelnick
@riangha
And (last but not least)
Francine E. Garrett-Bakelman
7/7