Course announcement - Phylogenomic data analysis and visualization using ETE Toolkit.
Where: Madrid, Spain.
When: Nov 13-17th, 2023
Registration (free): bit.ly/ete_workshop
Topics: programmatic reconstruction, analysis, handling and visualization of phylogenetic trees.
Replying to @damdevienne
Hi Damien! also possible in PhyloCloud, which uses ete4 in the backend. @deng_ziqi
phylocloud.cgmlab.org/
We are starting our third #ETE4 hackathon day. Yesterday was very productive, with ppl making progress in the visualization of large gene phylogenies with taxonomic info, biogeographic data, HyPhy bindings, phylogenetic profiling, tree handling, and much more.
Today we started our first hackathon! 5 days , 14 people coding together at @CBGP_Madrid + a few other online.
Our main goal is to boost the release of the new ete4 version, which will include a new visualization system able to explore huge trees! #ETE4 funded by @cziscience
nice use of ETE3 methods for orthology prediction, auto rooting and phylogenomics analysis of newly sequenced wheat gene families: science.sciencemag.org/conte…
Nice web implementation of ETE-build for online #reproducible #phylogenetic reconstruction at
genome.jp/tools/ete/
Online #ete3 meeting Wed 22 from 16:00-18:00 CET to discuss #GSoC17 projects, features and future...Everyone invited
github.com/etetoolkit/ete/wi…
ETE fine-grained #orthology predictions used on @eggNOGdb phylogenies for fast (meta)genome functional annotation:eggnog-mapper.embl.de
Replying to @pathogenomenick
. @pathogenomenick @DrKatHolt perhaps useful:given tree & alg, plot internal branch changes gist.github.com/jhcepas/868b…
the online tree viewer allows now to share links to your tree and alignment images: etetoolkit.org/treeview/












