@compomics

The CompOmics group specializes in the management, analysis and integration of high-throughput biological data

 Ghent, Belgium
compomics.com
Joined November 2011
  • Tweets750
  • Following197
  • Followers1.3K
55Media
Replying to @RalfGabriels
@RalfGabriels taking the scene to demonstrate the latest & greatest out of the @compomics group - data analytics are sure to take us where we need to be as a field! #iSCMS2024
4
11
564
Happy #HUPO2025 Wednesday! Today from @CompOmics: @TineClaeys1's talk on tissue-specific #PTMs and posters by @RobbinBouwmees, @Pathmanaban_, and @p_verschaffelt.
1
5
266
@CompOmics Tuesday at #HUPO2024: Join us at the @BrukerMassSpec Lunch Symposium to learn about TIMS²Rescore, at the #Bioinformatics session for Enrico's talk on modification-dependent protein associations, and checkout our posters on #MachineLearning, #Metadata & #Metaproteomics.
1
4
280
Today from @CompOmics at #HUPO2024: #metaproteomics posters, lots of initiative posters, #Bioinformatics Hub, and both @RobbeDevreese and Alireza Nameni's 3-Minute Thesis Competition.
4
2
6
1,463
Replying to @compomics
@Compomics is on its way to Dresden for #HUPO2024! Come say hi at our posters, listen to the sessions or join us at the bioinformatics hub. Looking forward to see you there!
4
1
8
439
🚨 Our new review on 𝘥𝘦 𝘯𝘰𝘷𝘰 sequencing in metaproteomics is out! Check it out on ChemRxiv: chemrxiv.org/engage/chemrxiv… 🙏@tvdbossche @denisbeslic, @SamPuyenbr49385, Tomi Suomi, @HolsteinTanja, @EloLab_fi and Thilo Muth #metaproteomics #microbiome #bioinformatics @MetaP_Init

Metaproteomics beyond databases: addressing the challenges and potentials of de novo sequencing |...

Metaproteomics enables the large-scale characterization of microbial community proteins, offering crucial insights into their taxonomic composition, functional activities, and interactions within...

chemrxiv.org
4
8
539
Proud to finally have this one out! A great collaborative effort with two of my heroes @1jvaneyk and @CwittieH
jennifer van eyk@1jvaneyk
15 Jun 2024
Acoustic ejection mass spectrometry empowers ultra-fast protein biomarker quantification | Nature Communications nature.com/articles/s41467-0…

Acoustic ejection mass spectrometry empowers ultra-fast protein biomarker quantification

Nature Communications - There is an increasing demand for high sample throughput beyond traditional analytical techniques. Here the authors show that Ultra-high throughput assays, based on the...

nature.com
3
11
1,012
Fresh from the @Matrix_Science breakfast seminar at #ASMS2024: MS2Rescore will be integrated into Mascot 2.9. Simply enable it by ticking the checkbox ✅
2
11
545
The cool kids are in the back! Join me today at the bioinformatics hub at #ASMS2024 located on the left side of the poster hall. Let's talk metadata ✌️
4
13
962
Excited about our line up at #ASMS2024 this year! Attend our #presentations, join the #discussions and #workshops, visit our #posters, and checkout the #3DPrinting exhibit. We've got many cool new things to share!
7
15
1,290
Preparing for the 3D print exhibition at #ASMS2024, I think these will look pretty nice!
4
35
1,467
CompOmics retweeted
An Staes@AnStaes
26 Apr 2024
Here it is: our paper on the benefit of using in silico predicted libraries in DIA 🎉🎉🎉😎🙏 pubs.acs.org/doi/10.1021/acs… @KrisGevaert_VIB @RalfGabriels @RobbinBouwmees @SaraDuf79861163 @mtpmmaia @VIBProteomxCore @ImpensLab

Benefit of In Silico Predicted Spectral Libraries in Data-Independent Acquisition Data Analysis...

Abstract. Data-independent acquisition (DIA) has become a well-established method for MS-based proteomics. However, the list of options to analyze this typ

pubs.acs.org
1
14
40
2,803
No notes. @pride_ebi 's LLM chatbot does everything I expect it to do
2
16
435
Really excited to see this published! We have worked on this for quite a few years; to see it come together in this paper is very rewarding: sciencedirect.com/science/ar… Definitely give it a read if you are interested in predicting CCS values with ML and molecular dynamics combined.
2
4
29
1,487
Happy to announce MS²Rescore v3.0, our much-improved platform for #MachineLearning-driven rescoring of #Proteomics search results. Read more in our publication or in the thread below. bit.ly/3VjMHOg
2
12
2
40
4,365
The @compomics team is present at the #PSI2024 meeting in Kyoto, Japan. Ready for proteomics standardization! @Pathmanaban_ @tvdbossche – at Kyoto-shi Kamigyo-ku, Kyoto
1
4
31
1,310
Really looking forward to this webinar! Presentation of ProteoBench: community effort to compare MS analysis software tools. (beta version: proteobench.cubimed.rub.de/) Webinar takes place the 27th of February at 6pm CET (register here: shorturl.at/czAQ0)
9
26
1,651
Incredibly excited and proud to announce our latest work in Nature Communications 🎉 We introduce lesSDRF, an innovative tool revolutionizing metadata annotation in proteomics using the SDRF format. 🔗 Check out our article: nature.com/articles/s41467-0… (1/3) #proteomics #metadata

lesSDRF is more: maximizing the value of proteomics data through streamlined metadata annotation

Nature Communications - Public proteomics data often lack essential metadata, limiting their potential. To address this, the authors developed lesSDRF, a tool to simplify the process of metadata...

nature.com
1
13
1
45
4,001
Super happy to announce the new release of @nf_core /mhcquant: A @nextflowio based pipeline to identify and quantify @immunopeptidomics data. We did some major rework towards structure and performance of the pipeline (1/4) github.com/nf-core/mhcquant/…

Release mhcquant 2.5.0 - Angry Bird · nf-core/mhcquant

Added #267 Support for brukers tdf format by adding tdf2mzml converter #269 DeepLC retention time prediction (shout out to @steffenlem) #270 MS2PIP peak intensity prediction (shout out to @steffen...

github.com
1
7
34
2,869
CompOmics retweeted
EuBIC-MS@EuBIC_ms
29 Sep 2023
Registration for the #EuBIC2024 Winter School on Computational Mass Spectrometry is now open! 🎉 Don't hesitate to register; the event is limited to 115 participants. Early bird registration closes on 13/11/2023. 📅 All info on eubic-ms.org/events/2024-win…
19
3
25
4,108
Load more