We're empowering microbiology labs to prevent and treat infections with nucleic acid sequencing.

Vancouver, Canada
Joined April 2020
BugSeq retweeted
New genomic tools are helping strengthen Canada's response to emerging pathogens and antimicrobial resistance. @techcouver @bugseq Read more: techcouver.com/2026/08/04/wi… #Genomics #PublicHealth #AMR #AntimicrobialResistance #InnovationBC
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Pathogen surveillance relies on fast and accurate data analysis, but NGS pipelines can be complex and resource-intensive. Our event will show how @bugseq simplifies analysis for organism identification, AMR detection, and outbreak tracking. Sign up here: event.on24.com/wcc/r/5066485…
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NGS has improved pathogen surveillance, but complex bioinformatics pipelines can hold many labs back. Join our upcoming webinar to learn how @bugseq makes advanced microbial ID, AMR detection, and outbreak tracking accessible to every lab. Register here: event.on24.com/wcc/r/5066485…
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Infectious disease outbreaks continue to pose significant challenges to public health. Discover how nanopore technology enables real-time, comprehensive genomic characterisation of pathogens & antimicrobial resistance (#AMR) to improve outbreak management: bit.ly/49i0OXA
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Medical microbiologists are tracking bacterial outbreaks using @nanopore & @bugseq's end-to-end solution. In this webinar learn how this solution is providing comprehensive genomic characterisation of pathogens & vital info for public health response: bit.ly/3PH2Fyq
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In this webinar, discover how rapid, accessible #nanopore sequencing and @bugseq analysis enables swift and accurate investigation of bacterial community clusters, antimicrobial resistance profiling, and contributes to outbreak management. Register here: bit.ly/43CrwJx
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If you missed it last week, don't worry you can still catch these presentations on demand! Check out our latest webinar on genomic surveillance and epidemiology, with two amazing researchers who share their innovative research. workcast.com/register?cpak=2…
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At #ECCMID2023 ? Come check out our poster P1840 from now until 1:30pm! We optimized and performance tested an end-to-end mNGS assay for respiratory viral detection @bugseq @BARDA @MangesLab
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As far as my experience with the tool @bugseq is a very reliable way to analyze sequencing data (i tried with @nanopore). Definetily worth a shot.
Attending #ECCMID2023? Stop by booth B4-11 to learn about our leading bioinformatics platform, ask the experts about your project and grab some swag. @ESCMID
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BugSeq retweeted
We put @BugSeq to the test for metagenomic read classification, and they delivered. BugSeq was a top-performing method, achieving perfect precision and high recall for all #PacBio HiFi datasets, and demonstrated the power of using long reads for microbial species detection.
BugSeq is excited to partner with @PacBio as a leading analysis provider for microbial sequencing data 🦠 bugseq.com/news/BugSeq-PacBi…
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Had a great time attending and presenting some of our recent work from @MangesLab @bugseq @VCHResearch this week @ihmc2022 #ihmc2022 – at Kobe City Chuo Ward, Hyogo
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Check out our latest preprint in collaboration with @VCHhealthcare @bugseq! We assess whether compositional changes in a nasal microbiota as associated with SARS-CoV-2 disease status and COVID-19 severity @MangesLab
Alterations in the Nasopharyngeal Microbiome Associated with SARS-CoV-2 Infection Status and Disease Severity medrxiv.org/cgi/content/shor… #medRxiv
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BugSeq has received funding from @HHSGov BARDA to develop a nanopore sequencing-based test with the potential to identify all respiratory RNA viruses. Building on previous #SARSCoV2 research BugSeq could enable early ID of infections from pathogens: bit.ly/3MSQ5IC
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BugSeq retweeted
How do we change the paradigm of care for viral infections when testing is limited? #DRIVe is collaborating w/ multiple partners to advance next-generation sequencing diagnostic technologies to detect known & novel respiratory RNA viruses. Read more: medicalcountermeasures.gov/n…
Top performers are long read methods including @bugseq and MEGAN-LR (using DIAMOND to NCBI nr), which had very high precision and solid recall (with no filtering necessary!). MMseqs2 and MetaMaps required some filtering to reduce false positives, but they also performed well. 2/8
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We are also closely following the progress of bioinformatics solutions that could help ease deployments. If you don't need a bioinformatician in each lab, you can deploy sequencing to more labs. @bugseq @czbiohub
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#metagenomics tool update: New plots to show details of MAGs from metagenome assembly! Example plots from @PacBio sequencing of herbivorous mammal gut microbiome, assembled with #hifiasm-meta. Generated 145 HQ MAGs in total, with 56 single-contig MAGs! Long reads for the win!
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PGCMin, together with Project Accessible Genomics, held a genomic sequencing of wastewater samples samples using a handheld MinION sequencer with Oxford Nanopore Technology. @nanopore
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