@breedingapi

BrAPI - The Plant Breeding API

brapi.org
Joined June 2020
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@denbiOffice Quarterly #Newsletter Edition 36 / June 2024 is out now! Topics: 3rd #BioHackathon Germany, de.NBI/ELIXIR-DE All Hands Meeting, de.NBI working groups & Reviews of Spring School 2024, @breedingapi Hackathon, & @ELIXIREurope AHM 2024. Read more denbi.de/news1/1740-newslett…
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We've just release a new version of #Helium mainly focussing on @breedingapi trait data import. We've also added support for more parent type options and improved rendering quality on mobile devices, though 🚀 #pedigree #visualization helium.hutton.ac.uk
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We are #BrAPI #hackathon 2024 in Luther City Wittenberg
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Waiting for my flight back home after a productive week at @LeibnizIPK and the @breedingapi hackathon. The weather is appropriately Scottish, feels like I'm already home 😂
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That was a great #BrAPI Hackathon 2024 week in Lutherstadt Wittenberg, Germany together with @basti_beier @BazRaubach @cyril_pommier @Stephan__Weise @UweScholz271 a.o. to work on @breedingapi. Thanks @denbiOffice for support. Special thanks to Uwe and Sebastian for organization.
de.NBI / ELIXIR-DE@denbiOffice18 Apr 2024
We are #BrAPI #hackathon 2024 in Luther City Wittenberg
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At the Open Access Week (#OAWeek) 2023, I participated in the Breeding API (#BrAPI) hackathon. I worked on integrating #EBS (Enterprise Breeding System), #OneCGIAR's chosen data management system, with our #QBMS R package. youtube.com/watch?v=cbCM5iHW…

Welcome & Community Updates - Session 1 - BrAPI Virtual Hackathon Oct...

Welcome & Community Updates - Session 1 - BrAPI Virtual Hackathon O...

youtube.com
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Happy to announce the new version of GridScore called NEXT 🎉 There's a huge list of new features just waiting to be explored. Why not give it a go? You can even migrate your existing trials to the new version. Check it out at: gridscore.hutton.ac.uk #phenotyping #gridscore
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Today we had an excellent presentation about the BrAPI project @breedingapi. If you missed it, you can watch it on our YouTube channel youtu.be/zRC3ASn8huc.
AgBioData@AgBioData6 Jun 2023
Join us tomorrow at 12 PM CT for our monthly webinar! Peter Selby will present on the BrAPI project and its applications in #plant #breeding. @breedingapi Don't know how to join? Join our community at agbiodata.org/user/register or contact us at [email protected]
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Working on a new version of #GridScore that'll support trials export via @breedingapi. Should come out by the end of next week alongside a new version of @GerminateHub Keep a eye on the respective Twitter accounts for the official announcement 🎉
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Iain Milne presents to @pagmeeting tools and technologies to assist crop breeding developed at @JamesHuttonInst @HuttonICS @cropgeeks #germinate #brapi #flapjack #curlywhirly #helium #tablet #buntata More info and software tools here: ics.hutton.ac.uk/software/
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Professionally, I've another year of efforts to advance #data #standard s for #agronomy. As hard as exciting #agrifood #brapi #miappe #isatab #opendata #datascience #knowledgegraphs #bioinformatics @KnetMiner @ELIXIREurope #BioHackEU22 @Rothamsted #agrischemas
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How is @CGIAR Accelerated Breeding Initiative working with partners? What's the vision? What's been achieved? What's YOUR feedback? 🌐Join the team for their first Update Session 📅 Dec 8: 13:00-13:50 GMT @CIMMYT @irri @Cipotato @BiovIntCIAT_eng + cgiar.org/news-events/event/…
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Soon we'll be able to share some exciting news about the #pedigree data viewer #Helium! For now just some teaser screenshots. #brapi #germinate
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I am happy to let you know that I released v0.8 of the QBMS R package. It now supports the core functionalities of query & retrieves SNPs data from GIGWA, enabling you to integrate it into your analysis pipelines(s) to perform GWAS and GS analysis as well: icarda-git.github.io/QBMS/
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Join us for the last day of our community workshop. Today we have the #Ontology #Datafederation and #Datacollection working groups. Great people, great ideas, great time! #FAIRsharing #agriculture #genomics #breeding agbiodata.org/node/475
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We released v0.7 of the #QBMS #RStats package. It can serve as an intermediate layer to hock your R-based analyzing pipeline smoothly to any #BMS or #BreedBase system via #BrAPI protocol. @IBPlatform @BTIscience @breedingapi @ICARDA icarda-git.github.io/QBMS/
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This talk introed with some relaxing background music, a great soothing way to start a talk 😍 @breedingapi enhances plant breeding communication data, recognising that transforming between data formats is often a huge challenge for researchers.
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Voila! Our QBMS is on the CRAN repository now 👏 #BMS #RStats #CRAN #BrAPI @breedingapi @IBPlatform @ICARDA cran.r-project.org/web/packa…

QBMS: Query the Breeding Management System(s)

This R package assists breeders in linking data systems with their analytic pipelines, a crucial step in digitizing breeding processes. It supports querying and retrieving phenotypic and genotypic...

cran.r-project.org
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Our software developers at the @robbins_lab have an idea 💡 💭 What if we could leverage the @breedingapi standard combined with code generation tools to create limited scope applications for both single-use & rapid prototyping? ilci.cornell.edu/2021/07/09/…
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JUST LAUNCHED: The numbers are in. Real results from EiB & partners New #EiBAnnualReport features: 🔢 27 vital numbers 📜 10 success stories 🛠️ 20 resources @AfricaRice @BiovIntCIAT_eng @CIMMYT @Cipotato @ICARDA @ICRISAT @IITA_CGIAR @irri @RTB_CGIAR 👉excellenceinbreeding.org/ann…
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