
NIH new innovator, Moore inventor fellow, Professor @KU, PLoS CompBio editor, Protein Society executive council, protein design & evolution of OMPs & enzymes
Lawrence, KS she/her
Joined February 2016
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Joanna Slusky š« retweeted
Replying to @SluskyLab
@SluskyLab and her truck load of beta barrels at #rosettacon.
Joanna Slusky š« retweeted
Come see the scientists that should've shared the Nobel Prize for "Computational Protein Design", speak:
ipd.uw.edu/protein-design-thā¦
Joanna Slusky š« retweeted
Years ago I decided to only publish and serve on @plantdisease journals. I have an automated response I use for requests from other journals. Recently, several colleagues have asked me for it, so decided to share here in case it is helpful š #AcademicChatter
Joanna Slusky š« retweeted
With David and the Baker Lab in the spotlight today, I wanted to share some insights into the @UWproteindesign and how it operates, a glimpse behind the curtain. I had planned to write this post-graduation, but now seems as good a time as any. (Got twitter blue free trial so this could all fit in less tweets!)
First, the lab is enormous. ~60 grad students, ~60 postdocs, a handful of visitors, undergrads, and a surrounding institution of another 150 or so. Collaboration is strongly encouraged (even mandated) by David, who sets up pro-collaboration incentives. Notably, he's fine with grad students graduating without a sole first-author paperāit's acceptable to "only" have worked as a co-first author. This is a key ingredient in the secret sauce: the tight collaboration between wet lab and dry lab. It ensures that all our work is ultimately grounded in strong wet-lab validationāour "oracle" is the real world, not another computational model.
While we have regular meetings for different subgroups and the entire group, much information travels through the lab via informal one-on-one interactions. In some ways, it reminds me of a classic "tribe of humans in the state of nature"ā100-200 people with no clear hierarchy, passing information via "gossip". Itās maybe not the most complete way of ensuring everyone is on the same page, but saves time as we arenāt drowning in endless meetings.
Does David stay in touch with all these grad students and post-docs? Remarkably, yes. Unlike some very large labs known for being run entirely by post-docs, he knows exactly what everyone is working on and the stage of their projects. Each member has monthly one-on-ones with him, and monthly subgroup meetings that David attends. If he suggests you try something at your previous one-on-one, you'd better have it done by the next.
Does he actually contribute research ideas, or is he more of a detached big-picture project manager? Definitely the former. He understands the intricacies of a shocking range of topics. I'll be discussing some arcane deep learning concept with him, and then he'll turn around and talk to someone about the details of a catalytic mechanism. He's actually the most hands-on PI I've ever hadāif anything, he verges on over-managing rather than being too detached.
How does he keep track of everything? Partly, he's just a brilliant person with exceptional recall. But he has also built infrastructure above and below him in the lab to handle many of the details, bureaucracy, big picture, and management tasks. This allows him to spend most of his day doing what he's most passionate about and skilled at: walking around talking to people about science. He also lives very much in the moment and in his own words, ānever thinks very far ahead". To keep up with tools, methods, and wet lab techniques, he does the occasional project and design campaign himself on the side when time allows.
It's still a tremendous cognitive load to keep all this in his head, but as much as possible, he has offloaded non-scientific cognitive burdens. It helps that heās in the lab in person most days of the year, rarely traveling for conferences or talks, instead doing them over Zoom or not attending. (1/2).
BREAKING NEWS
The Royal Swedish Academy of Sciences has decided to award the 2024 #NobelPrize in Chemistry with one half to David Baker āfor computational protein designā and the other half jointly to Demis Hassabis and John M. Jumper āfor protein structure prediction.ā
Joanna Slusky š« retweeted
This year's chemistry #NobelPrize is all about proteins! Baker, Jumper and Hassabis' contributions will allow scientists to tackle challenges like antibiotic resistance and plastic degradation. ow.ly/ViNb50THRRu
©Johan Jarnestad Royal Swedish Academy of Sciences
Joanna Slusky š« retweeted
De-escalate the perceived and real costs and benefits of experiments coming out in any particular direction. Thatās what you can do as a PI.
Joanna Slusky š« retweeted
Dear cryo-EM women scientists,
We want to honor you and your contributions at BPS 2025.
This year, the Cryo-EM subgroup will honor a mid/senior-career woman scientist as the inaugural June Almeida awardee.
June Almeida is the virologist who first discovered the coronavirus in 1967 using negative stain electron microscopy. Her story, like many women we know, is remarkable. womenshistory.org/education-ā¦
It is in the spirit of June Almeidaās innovative research that this award is named. The awardee, in addition to receiving an honorarium, will present their research at the BPS CryoEM Subgroup Symposium.Ā The deadline for nominations for the Almeida Award is November 1st, and details of the award and the application process can be found at (biophysics.org/Awards-Fundinā¦). Nomination packets should be sent toĀ [email protected].
Questions? Contact @OliBClarke, me, @MeghnaG27 @PilarCossio2 or @10feng
ā„ļøWe sincerely hope to see you at BPS 2025 in LA to celebrate achievements and advances in cryo-EM!
Joanna Slusky š« retweeted
#1 ingredient for a successful job hunt: Job Market Objective Function.
Without your own objective function, itās scarily easy to accidentally adopt someone elseās goals. Clearly, maximizing someone elseās goals means youāre unlikely to reach your true optimal outcome.
Joanna Slusky š« retweeted
Janice L. Robertson to Receive 2025 Agnes Pockels Award in Lipids and Membrane Biophysics
ow.ly/kYpV50TuGhz
@WUSTL @RobertsonWUSTL
Joanna Slusky š« retweeted
A new grant of $1.8 million from The National Institute of General Medical Sciences at the National Institutes of Health was awarded to Erik Holmstrom from @KUMolBio
molecularbiosciences.ku.edu/ā¦
Joanna Slusky š« retweeted
A student asked me a question: I am sometimes told that it is āeasierā for me in STEM as a student from an UR background because of all the grants available to me. How do I respond to this?
I wanted to expand on my answer a bit hereā¦
Joanna Slusky š« retweeted
Where do you post job announcements?
SACNAS, GSA, and others all assume I have $500 to spend for a few weeks on their job boards.
I want to reach applicants but so far have not found many viable options. #help
Assistant Researchers Apply here:
employment.ku.edu/staff/2812ā¦
Joanna Slusky š« retweeted
Pro-tip for molecular biology: unless you absolutely know it doesnāt matter, it probably does.
Joanna Slusky š« retweeted
Black box models are named after āblack boxesā⦠which to be clear are recording devices built into airplanes solely for the purpose of explainability.
Joanna Slusky š« retweeted
That amazing paper you spent years on? That amazing breakthrough you had? Very likely you built this following the work of others (very few exceptions), just as others will build off yours. Science is a continuum. Want to leave a lasting legacy in science? Be generous & be kind.
Joanna Slusky š« retweeted
Congratulations to Chien-Wei Wang (Whelan lab, Chemistry), for winning the 2024 Newmark Award for excellence in biochemical research.
Joanna Slusky š« retweeted
Congratulations to the finalists of the Newmark Award for excellence in biochemical research -- Kyle Gossman (Pharm Tox), Chien-Wei Wang (Chemistry), Parker Sperstad (MB), and Joseph O'Connor (MB). They gave excellent oral presentations at the @KUMolBio seminar, Apr 8, 2024
Joanna Slusky š« retweeted
Excited to be starting my lab at @KUMolBio this summer! Be on the lookout for whatever tweets are called now about positions and new research in the Beck Lab.
Joanna Slusky š« retweeted
What a load of utter crap. The usual mistake of the arrogance of academia. What is of disinterest to you may very well be of interest to another. Our repeated inability to predict the most important science is why we need less gatekeeping, not more.
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