@KPraebel

Evolution, speciation & pop genetics. e/aDNA for understanding interactions and diversity. Professor, group leader @UiTGenetics, dad, bonusdad, and nature lover

 Tromsø, Norge
Joined August 2015
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  • Followers1K
188Media
New paper out where we demonstrate how pop gen parameters and scoring of structural variants (inversions) could be affected by the choice of reference genome (both in terms of both quality and relatedness). link.springer.com/article/10…

Reference genome bias in light of species-specific chromosomal reorganization and translocations

Genome Biology - Whole-genome sequencing efforts, have during the past decade, unveiled the central role of genomic rearrangements—such as chromosomal inversions—in evolutionary...

link.springer.com
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Тhe first data release from the European Marine Omics Biodiversity Observation Network (EMO BON), an initiative of @embrc_eu and part of @OBISNetwork's efforts to fill the gaps in our current knowledge on biodiversity of the world's oceans: doi.org/10.3897/BDJ.13.e1435…
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Kim Praebel retweeted
Mathilde Horaud@MHoraud16 Feb 2025
🎉 Thrilled to share my first PhD paper: onlinelibrary.wiley.com/doi/… Huge thanks to co-authors @raventos_nur, @KPraebel, @GaliaCampsOmics, @_cintapq, @CCarrerasHuergo, @PascualBerniola, Victor M. Tuset, @sbhat1984, @LyArve and funding from #UiT & #Norbis. 🙌🐟

Allochrony in Atlantic Lumpfish: Genomic and Otolith Shape Divergence Between Spring and Autumn...

Allochrony is a form of reproductive isolation characterized by differences in the timing of spawning and may play a crucial role in the genetic and phenotypic divergence within species. The Atlant...

onlinelibrary.wiley.com
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Save the Date: MOD Alliance Webinar#2! Host:@MARCOBOLO_EU When? 🟠19 Feb 2025 at 5:00 PM CET Who?🟢@DanLear (MBA) & @plbuttigieg (AWI) What?🔵Improving Biodiversity (Meta)Data Flow: Standards and Strategies 👉 marcobolo-project.eu/moda-we… #Biodiversity #DataStandards #Webinar
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Kim Praebel retweeted
Gledis Guri@gledguri12 Dec 2024
📄NEW PAPER exploring #eDNA quantification methods! For #qPCR / #ddPCR end users aiming to enhance sensitivity & precision in detecting low eDNA quantities – a common challenge in #MarineEcology surveys. Bonus: An alternative framework for LoD & LoQ. doi.org/10.1002/ece3.70678

Quantifying the Detection Sensitivity and Precision of qPCR and ddPCR Mechanisms for eDNA Samples

This study compares the sensitivity and quantification precision of qPCR and ddPCR for eDNA surveys through Bayesian inference using latent parameters from both known concentration (standards) and...

onlinelibrary.wiley.com
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#EMOBON | Our Ocean #DNA sampling efforts continue 🧬 The 5th sampling campaign is now live! Collecting genomic data helps us 🔵 Monitor biodiversity health 🔵 Understand complex natural systems 📸 Share pics of your sampling efforts, we need your help to spread the word!
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📢Students and recent grads, are you interested in the Arctic and exploring work in an international environment? Then look no further, because the Arctic Council Secretariat in Tromsø 🇳🇴 is hiring an intern! Learn more and apply by 7 October👉 arctic-council.org/about/job…
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🌍💧#WorldWaterMonitoringDay is a day to highlight the innovative tools @MARCOBOLO_EU is enhancing to monitor #marine, #coastal, and #freshwater biodiversity! Our motto: Strengthening biodiversity observation in support of decision making🌊 #BiodiversityObservations #HorizonEU
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Kim Praebel retweeted
Milton Tan@mtanichthys28 Aug 2024
As a reminder I'm searching for a PhD student interesting in working on our NSF-funded project on minnow evolution and diversification. I made a post to EvolDir:
EvolDir@evoldir28 Aug 2024
Fwd: Graduate position: UIllinois.FishEvolutionGenomics ift.tt/fysIGU4

Fwd: Graduate position: UIllinois.FishEvolutionGenomics

Begin forwarded message: > From: [email protected] > Subject: Graduate position: UIllinois.FishEvolutionGenomics > Date: 28 August 2024 at 06:43:08 BST > To: [email protected] > > >...

evoldir.tumblr.com
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Sex-specific selection on reproductive fitness contributes to the maintenance of variation at a large effect locus in Atlantic salmon. And - we got the cover photo too! 😉👍 @kenyon_mobley @FishConGen @helsinkiuni @UiTNorgesarktis @LukeFinland onlinelibrary.wiley.com/doi/…
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We are hiring! Please retweet! oist.jp/careers/coral-reef-f…
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Kim Praebel retweeted
Eric Capo@ericcapo129 Jul 2024
We have an open post-doc position in my lab in collab with @SFI_elibby to do some cool environmental paleomicrobiology modelling. Apply to join us at @umeauniversity !
Integrated Science Lab@IceLab_umea9 Jul 2024
Seeking a #postdoc fellowship - we want you! The IceLab #multidisciplinary postdoctoral fellowships are accepting applications now. Interested in collaborative projects combining computational and empirical research? Join IceLab! icelab.se/opportunities/mult…
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We are excited to share our new paper introducing a new tool for scrutinising #ancientDNA data - AMBER - and using this tool to examine reference genome alignment bias. doi.org/10.1093/bioinformati…

Unravelling reference bias in ancient DNA datasets

AbstractMotivation. The alignment of sequencing reads is a critical step in the characterization of ancient genomes. However, reference bias and spurious m

academic.oup.com
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📢 The 2024 Call for Projects by @FPA2 is open! 🌍🌊 Funding available for a broad range of projects focusing on: 🔹 Protection & conservation of polar ecosystems 🔹 Climate change, biodiversity or water 🔹 Deadline: 30 June 2024 Submit your proposals now: buff.ly/4erOVSO
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#EMOBON I Ready, set, sample! 💧 Our 3rd sampling campaign is live 🚀 🔊Calling all our EMO BON team members: we need your active participation! 💡Keep complete metadata records 💡Update spreadsheets ASAP 💡Share pics & videos on social media #WorldOceanDay #MarineScience
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Kim Praebel retweeted
ECMWF@ECMWF10 Jun 2024
🌍🌐 The official launch of the EU’s #DestinationEarth Phase II takes place today at the EuroHPC LUMI Supercomputer Center in Finland. Find out more about the initiative, which aims to build a digital replica of our planet, and our role ➡️ ecmwf.int/en/about/media-cen…
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The Ancient Environmental Genomics PhD course will be running this September 22nd-27th. Make sure to sign up as there are a limited number of seats. I am really pleased that we will have talks by Benjamin Vernot, Karina Sand, Pete Heintzmann and 🧵 phdcourses.ku.dk/detailkursu…
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Kim Praebel retweeted
MARCO-BOLO@MARCOBOLO_EU5 Jun 2024
🌟 On this #WorldEnvironmentDay, let's celebrate the beauty and importance of our aquatic wildlife! @MARCOBOLO_EU is committed to enhancing marine, freshwater and coastal biodiversity through data-driven research and collaboration! Read more: marcobolo-project.eu/ 🌊🌿
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What a day! Defending her PhD-thesis with bravour 🎉🎉 So proud of you @arctogad_sivus Thanks to the two opponents for the nice discussion @FishConGen @RubySeadragon
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Happy #BiodiversityDay! 🌊🪸🦠🐙🪼🦀🦐🦪🐟🐠🐬🦈🦭🐳 We have #Biodiversity up to our title: MARine COastal BiOdiversity Long-term Observations. Have a look at marcobolo-project.eu/ to see what @MARCOBOLO_EU does to help aquatic biodiversity! #GBF #TheBiodiversityPlan
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