Genomics Geoff (with a J) (@GenomicG) header
Genomics Geoff (with a J) (@GenomicG) profile picture

Genomics Geoff (with a J)

@GenomicG

#illumina - Genomics padiwan.

Joined January 2021
  • Tweets160
  • Following227
  • Followers136
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Genomics Geoff (with a J) retweeted
Mike Lelivelt (@lelivelt) profile picture
Mike Lelivelt@lelivelt27 Oct 2022
Standing room only at #ASHG22 for Andrew Shaver to discuss Illumina Complete Long Reads
Image from Mike Lelivelt (@lelivelt)
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Genomics Geoff (with a J) retweeted
Patrick Short (@patrick_j_short) profile picture
Patrick Short@patrick_j_short29 Sep 2022
$200 whole genome announced by @illumina. Machines cost $1.25m and can do 20k per year. However, What’s always struck me is how they stay ahead by solving the ‘whole problem’. not just throughout/cost but also eliminating need for refrigerating reagents, 1 box instead of 3. #IGF
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Genomics Geoff (with a J) retweeted
Elli Papaemmanuil, PhD (@PapaemmanuilLab) profile picture
Elli Papaemmanuil, PhD@PapaemmanuilLab29 Sep 2022
#NovaseqX is here to produce 20,000 human WGS per year. Promise of increased accuracy + #dragen integration. List price $200 per genome. The time for bringing comprehensive clinical grade whole genome sequencing to patients is NOW. @illumina isabl.io #IGF
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Genomics Geoff (with a J) retweeted
Anthony Beckhouse (@AntoBeck) profile picture
Anthony Beckhouse@AntoBeck29 Sep 2022
We've got a new baby #NovaSeq X and X Plus with #XLEAP-SBS..... @illumina #IGF Look at that smile on @fdesouza #genomics . 8 lanes are back baby!! With #DRAGEN on board! 20,000 WGS per year. 2.5X NovaSeq 6000.
Image from Anthony Beckhouse (@AntoBeck)
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Genomics Geoff (with a J) retweeted
Gary Schroth (@Genomics_Guy) profile picture
Gary Schroth@Genomics_Guy18 Jul 2022
This is going to be so exciting! Illumina Announces Inaugural Illumina Genomics Forum with a Conversation with Former U.S. President Barack Obama prn.to/3cn0vD0
Illumina Announces Inaugural Illumina Genomics Forum with a Conversation with Former U.S. President...

Illumina Announces Inaugural Illumina Genomics Forum with a Conversation with Former U.S. President...

/PRNewswire/ -- Illumina, Inc. (NASDAQ: ILMN), a global leader in DNA sequencing and array-based technologies, today announced that former President of the...

prnewswire.com
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Genomics Geoff (with a J) retweeted
Eric Topol (@EricTopol) profile picture
Eric Topol
@EricTopol1 Jun 2022
The mutations our blood cells acquire as we age—clonal hematopoiesis—is the norm, 10% of blood cells for age 70+, with marked reduction of diversity; 2 landmark studies @Nature @NatureNV summary 👇 nature.com/articles/s41586-0… nature.com/articles/s41586-0… nature.com/articles/d41586-0…
Clonal dynamics of haematopoiesis across the human lifespan

Clonal dynamics of haematopoiesis across the human lifespan

Nature - Haematopoiesis has high clonal diversity up to about 65 years of age, after which diversity drops precipitously owing to positive selection acting on a handful of clones that expand...

nature.com
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Genomics Geoff (with a J) retweeted
catharine.aquino (@CatharineAquino) profile picture
catharine.aquino@CatharineAquino18 Mar 2022
Running the #novaseq @illumina is a cool job
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Genomics Geoff (with a J) retweeted
Vanessa Moeder (@VanessaMoeder) profile picture
Vanessa Moeder@VanessaMoeder18 Jan 2022
Shameless plea for networking help (clinical ID/epi folks, please share)-> For the infectious disease leader with a passion for genomics and improving public health on a global scale, this is a once-in-a-lifetime opportunity @illumina: illumina.wd1.myworkdayjobs.c… #Genomics
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Genomics Geoff (with a J) retweeted
Illumina (@illumina) profile picture
Illumina
@illumina19 Jan 2022
We will reach the $100 genome. #TweetItIntoExistence
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Genomics Geoff (with a J) retweeted
Gary Schroth (@Genomics_Guy) profile picture
Gary Schroth@Genomics_Guy10 Jan 2022
New @Illumina #Infinity technology enables 10x greater throughput with 90% less DNA input than traditional long reads. #JPM2022 #JPM22
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Genomics Geoff (with a J) retweeted
Merrilyn Datta, Ph.D. (@merrilyn57) profile picture
Merrilyn Datta, Ph.D.@merrilyn5710 Jan 2022
Chemistry X. That’s it. That’s the tweet. @illumina #sequencing #NGS #JPM2022
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Genomics Geoff (with a J) retweeted
ACMG (@TheACMG) profile picture
ACMG
@TheACMG9 Jan 2022
Our letter to @nytimes editor responding to #NIPT screening article has been published. ACMG Pres-Elect Dr. Susan Klugman explains these are screening, not diagnostic, tests; more definitive tests follow positive screens, & pretest counseling is crucial. nyti.ms/3HP5LtA
Image from ACMG (@TheACMG)
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Genomics Geoff (with a J) retweeted
Muin J. Khoury (@MuinJKhoury) profile picture
Muin J. Khoury@MuinJKhoury2 Jan 2022
Screening tests are not diagnostic tests and their positive predictive values get progressively worse for rarer diseases, even with identical sensitivity and specificity. ncbi.nlm.nih.gov/pmc/article…
Sensitivity, Specificity, and Predictive Values: Foundations, Pliabilities, and Pitfalls in...

Sensitivity, Specificity, and Predictive Values: Foundations, Pliabilities, and Pitfalls in...

Within the context of screening tests, it is important to avoid misconceptions about sensitivity, specificity, and predictive values. In this article, therefore, foundations are first established...

pmc.ncbi.nlm.nih.gov
Sarah Kliff (@sarahkliff) profile pictureSarah Kliff
@sarahkliff1 Jan 2022
Replying to @sarahkliff
In our new @nytimes investigation, @aatishb and I spent months talking to experts, tracking down studies, and analyzing data. What we found: the tests’ findings of disorders are wrong a surprising amount of the time, between 81 and 93 percent. (2/5)
Image from Sarah Kliff (@sarahkliff)
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Genomics Geoff (with a J) retweeted
anode manuka 🇵🇸 🌍 (@th33mdphd) profile picture
anode manuka 🇵🇸 🌍@th33mdphd28 Dec 2021
The CDC now recommends mouth pipetting
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Woops. Just realised I’ve had my out of office on since December 2019.
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Genomics Geoff (with a J) retweeted
Dana-Farber News (@DanaFarberNews) profile picture
Dana-Farber News
@DanaFarberNews10 Dec 2021
New research in @TheLancetOncol shows HLA allele, HLA-A*03, is associated with poor clinical outcomes for cancer patients receiving #immunotherapy. The findings support HLA-A*03 as a potential biomarker for immunotherapy response. ms.spr.ly/6015Z8da7 cc @DanaFarber_GU
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Genomics Geoff (with a J) retweeted
Chris Hopkins (@cm_hopkins) profile picture
Chris Hopkins@cm_hopkins1 Dec 2021
ARTIC has released a patch for PCR primers...
Josh Quick (@Scalene) profile pictureJosh Quick@Scalene1 Dec 2021
Replying to @Scalene
There are 10 mutations in Omicron which affect primers in the V4 scheme which was designed against Alpha-Delta but not those that have emerged since.
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Genomics Geoff (with a J) retweeted
Lauren Pelley (@LaurenPelley) profile picture
Lauren Pelley@LaurenPelley1 Dec 2021
Not now
New Scientist (@newscientist) profile pictureNew Scientist
@newscientist1 Dec 2021
Merging black holes may create bubbles that could swallow the universe bit.ly/3Ee2Lpw
Black hole mergers may create bubbles that could swallow the universe | New Scientist

Black hole mergers may create bubbles that could swallow the universe | New Scientist

The area between a pair of large black holes on the verge of colliding could provide the conditions to create dangerous bubbles of "true vacuum"

newscientist.com
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Genomics Geoff (with a J) retweeted
Rady Genomics (@RadyGenomics) profile picture
Rady Genomics@RadyGenomics30 Nov 2021
"This was a gamechanger." A mother shares the story of her daughter Evelyn, who was critically ill in the @bronsonhealth NICU. Her rare genetic condition was diagnosed by rapid #WholeGenomeSequencing as part of #ProjectBabyDeer. Proud to partner with them. bronsonpositivity.com/i-cann…
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Genomics Geoff (with a J) retweeted
Theo Sanderson (@theosanderson) profile picture
Theo Sanderson
@theosanderson27 Nov 2021
For info: in some applications of ARTIC V4 primers (including Sanger's), Omicron mutations A23040G, G23048A, A23055G in 76_RIGHT cause drop-out of amplicon 76, leaving 22786-22974 uncovered and so missing calls for K417N, N440K, G446S
Image from Theo Sanderson (@theosanderson)
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