@BridgeDbProject

Identifier mapping project. More about us in https://xitter.cf/t.co/TsiypuBvTx…

bridgedb.org/
Joined August 2018
  • Tweets145
  • Following10
  • Followers103
29Media
new paper: "The FAIR Cookbook - the essential resource for and by FAIR doers" doi.org/10.1038/s41597-023-0…
Screenshot of how a FAIR CookBook recipe credits authors, by ORCID, using the CreDIT attribtution ontology, and how it has itself a global, unique identifier.

ALT Screenshot of how a FAIR CookBook recipe credits authors, by ORCID, using the CreDIT attribtution ontology, and how it has itself a global, unique identifier.

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Did you miss the @NWONieuws #OpenScience in Practice webinar on interoperable #openresearch with @egonwillighagen, @jambelien and Sander de Ridder? The recording is now available: nwo.nl/en/open-science-pract…
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Transparency is at the❤️of #openscience. Pleased to see @egonwillighagen's @NWONieuws's Open Science Fund proposal published in @RIOJournal. #opengrant This proposal is also part of the collection we released in January. @HLdeJonge @Stephi_HB tinyurl.com/2p9ajczk
NWO Nieuws@NWONieuws10 Mar 2022
Curious how a full proposal to #NWO's Open Science Fund looks like? @egonwillighagen published his successful proposal 'BridgeDb and Wikidata: a powerful combination generating interoperable open research (BridgeDb)' riojournal.com/article/83031… @RIOJournal #opengrant #openscience
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Thanks @NWONieuws for sharing this proposal on @BridgeDbProject , which was written up by @egonwillighagen , @mkutmon , @mmarvinm2 and @SMaLLCaT4Sci . #OpenScience used in @WikiPathways , @cytoscape , powered by (among others) @wikidata
NWO Nieuws@NWONieuws10 Mar 2022
Curious how a full proposal to #NWO's Open Science Fund looks like? @egonwillighagen published his successful proposal 'BridgeDb and Wikidata: a powerful combination generating interoperable open research (BridgeDb)' riojournal.com/article/83031… @RIOJournal #opengrant #openscience
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Curious how a full proposal to #NWO's Open Science Fund looks like? @egonwillighagen published his successful proposal 'BridgeDb and Wikidata: a powerful combination generating interoperable open research (BridgeDb)' riojournal.com/article/83031… @RIOJournal #opengrant #openscience
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So we have a lot of things that provide useful services to the life sciences and bioinformatics communities like @WikiPathways and @BridgeDbProject, and various R and @cytoscape apps. Do you want to work with us to maintain those and develop them further? academictransfer.com/en/3026…

Research software engineer supporting open-source bioinformatics software and services (0.6fte) at...

Do you want to play a role in creating the connection between ICT and Biology? Maastricht University is looking for a scientific programmer to join our Bioinformatics department (BiGCaT) to maintain,...

academictransfer.com
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LAST CHANCE TO REGISTER! See you tomorrow for our big #FAIRCookbook premiere with speakers from @emblebi @UniofOxford @BayerPharma @uni_lu @Novartis @JanssenEMEA Join the now +400 attendees for this #FAIRdata webinar
FAIRplus@FAIRplus_eu20 May 2021
+300 academia and industry experts have registered for the upcoming webinar to discover the #FAIRCookbook What are you waiting for? Less than a week left to join! ➡️ bit.ly/faircookbook_webinar @PistoiaAlliance @IMI_JU @SusannaASansone
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Here is a catalogue of 863 #Rett-syndrome-causing MECP2 mutations & lessons learned from their data integration, presented by researchers from @bigcat_UM @MaastrichtU @UniLeidenNews @BSC_CNS & @icreacommunity. go.nature.com/39DUGMw
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Highlighting collaborations with @lipidmaps, @CovidPathways, @EJPRareDiseases, @BridgeDbProject, @complexportal, @GuidetoPHARM, @wikidata, @neXtProt_news, @WDScholia, @nanopub_org, @EuropePMC_news, @PubMedOnline, @pybelbio, @PathMe3, @NDExProject, and more...
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Just out! Our new paper "WikiPathways: Connecting Communities" is now available @NAR_Open database issue. doi.org/10.1093/nar/gkaa1024

WikiPathways: connecting communities

Abstract. WikiPathways (https://www.wikipathways.org) is a biological pathway database known for its collaborative nature and open science approaches. With

academic.oup.com
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We are looking for a scientific programmer for our COVID-19 @WikiPathways project! Excited to get started! #Bioinformatics academictransfer.com/en/2938…

Scientific programmer supporting COVID-19 WikiPathways project

Maastricht University is looking for a scientific programmer to join our COVID-19 project focused on improving our pathway curation tools and developing automated analysis workflows.

academictransfer.com
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We are looking for a postdoctoral researcher for our COVID-19 @WikiPathways project. Focus on molecular pathway curation and data analysis. Excited to get started! academictransfer.com/en/2934…

Postdoctoral researcher working on better COVID-19 molecular pathways and using these for data...

Maastricht University is looking for a postdoctoral researcher to join our COVID-19 project focused on molecular pathway model curation and bioinformatics data analysis using omics data.

academictransfer.com
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3/5—@CovidPathways We also examined #interoperability for #COVID19 with ELIXIR Recommended Interop Resources: @BridgeDbProject, @isatools, @FAIRsharing_org @IdentifiersOrg @DisGeNET @EBIOLS and other key services @WikiPathways, @FAIRDOM_eu, @nanopub_org ➡️docs.google.com/document/d/1…
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There are many ELIXIR resources involved in the project, including the MINERVA platform, @FAIRDOM_eu, @BridgeDbProject, Identifiers.org @WikiPathways and others!
ELIXIR Europe@ELIXIREurope15 May 2020
Replying to @CovidPathways
@CovidPathways: a new project led by @elixir_lu to develop an interactive map of #SARSCoV2-host interactions. It builds on existing resources & collaborations within ELIXIR: is.gd/569u1c Featured in @ScientificData: is.gd/NqNUjg #ELIXIRvsCOVID19
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Replying to @CovidPathways
@CovidPathways: a new project led by @elixir_lu to develop an interactive map of #SARSCoV2-host interactions. It builds on existing resources & collaborations within ELIXIR: is.gd/569u1c Featured in @ScientificData: is.gd/NqNUjg #ELIXIRvsCOVID19
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Today and tomorrow we are at an online @ELIXIREurope hackathon on COVID-19 related interoperability issues. That includes a @CovidPathways track: docs.google.com/document/d/1… You can still join
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Replying to @wikidata
Find my poster on semantic web, kinetic data and metabolic disease pathways at nr.119, #metaboEU2020 , on @wikidata : wikidata.org/wiki/Q83403509 and @figshare : doi.org/10.6084/m9.figshare.… @bigcat_UM @Unimaas Using @WikiPathways @PathVisio @cytoscape @rhea_db and more!
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We had a major cyberattack on @MaastrichtU services. @PathVisio and @BridgeDbProject and @bigcat_UM websites are currently not reachable see maastrichtuniversity.nl/news… for updates

Cyber attack against UM

maastrichtuniversity.nl
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ours, the @BridgeDbProject and @PathVisio websites are all down for maintenance that takes longer than planned. They should be back later today.
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Replying to @BridgeDbProject
@BridgeDbProject 's API has been extended with interaction mappings today (from @rhea_db ); which are taken up directly by @WikiPathways pathways. Query from bridgedb.org/swagger/#!/Gene… (use ID without "RHEA", and Sys Code "Rh").
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