2nd CyanoCyc Online Mini-Symposium!
Register at tinyurl.com/ycxvwk76
@CyanoWorld1
A new article in Metabolite describes extensions to our Omics Dashboard tool for visual analysis of metabolomics and multi-omics data. We can see which cellular systems are changing their activity levels across multiple omics data types.
mdpi.com/2218-1989/14/1/65
Introducing our New Genome Browser:
The new version is much faster--it zooms and pans in real time. New features include the ability to extract sequence regions.
Check it out at: biocyc.org/genbro/genbro.sht…
Curated Synechococcus and Prochlorococcus Pathway Genome Databases at BioCyc.org
#ProSynFest2020
Replying to @davidendron
The uniprot ids are attached to the protein, not the gene, so add a transform to the gene product, select that column (by clicking on its header, can be tough to find the right spot but lower left usually works), then add a Database Links column, and select UniProt as the db.
Impact of Zero-Valent Iron on Freshwater Bacterioplankton Metabolism as Predicted from 16S rRNA Gene Sequence Libraries
doi.org/10.1007/s00284-021-0…
New paper from Current Microbiology that uses Pathway Tools and PathoLogic for pathway prediction.
New paper from BMC Genomics: Shotgun proteomics of peach fruit reveals major metabolic pathways associated to ripening
Pathway Tools was used to predict the metabolic pathways in Prunus persica and generate pathway diagrams.
bmcgenomics.biomedcentral.co…
New in BioCyc & Pathway Tools 24.5: The Metabolic Network Explorer is a novel tool for interactive exploration of the metabolic network around a set of connected compounds of interest. Easy to use, visually attractive, and customizable, check it out at biocyc.org/MetNetExplorer.sh…
BioCyc contains dbs for 127 Chlamydia genomes. New in BioCyc 24.5, C. trachomatis D/UW-3/CX has been upgraded to Tier2 status, with updated reaction and pathway predictions, new protein features, new complexes, and literature-based curation from 35 papers. biocyc.org/organism-summary?…










