Lydia Ng retweeted
The data involved with this research is freely available to accelerate research and discovery. Browse the SEA-AD Brain Cell Atlas, made possible by a @NIHAging-funded collab with @UWMedicine & @KPWaResearch.
🔗 portal.brain-map.org/explore…
#studyBRAIN
Lydia Ng retweeted
The study, published today in @NatureNeuro, involved over 3.4 million cells from 84 brains. Donors ranged from those with advanced Alzheimer’s dementia to unimpaired subjects without evidence of AD.
#studyBRAIN nature.com/articles/s41593-0…
Lydia Ng retweeted
📣NEXT WEEK! Join us @AllenInstitute for a night of storytelling that take you behind the scenes of Allen Institute science with @han_arbach, Ashwin Bhandiwad, Max DePartee, Rachel Hostetler & Rachel A McCue. 🎟️ Livestream & in-person tickets: ow.ly/skvC50Tannm
Lydia Ng retweeted
We've begun rolling out anatomical annotations to the Allen Brain Cell Atlas!
The first data set to support these annotations is the MERFISH Spatial Transcriptomics Dataset of a Single Adult Mouse Brain - registered to CCFv3. 🔗 knowledge.brain-map.org/abca…
Lydia Ng retweeted
Whole, healthy human brain data is now on the ABC Atlas!
Dataset incl. 3 million+ cells sampled from dissections from adult donors. Samples underwent snRNA sequencing and were clustered and categorized by neurotransmitter, region, and more.
ABC Atlas: portal.brain-map.org/atlases…
Lydia Ng retweeted
⭐New data are available on the Allen Brain Cell (ABC) Atlas
The ABC Atlas provides a platform for visualizing multimodal single cell data across multiple whole-brain datasets simultaneously. #OpenScienceWeek. Visit: portal.brain-map.org/atlases…
Lydia Ng retweeted
On this day in 2014, we published the Allen Mouse Brain Connectivity Atlas, the first comprehensive, large-scale data set on how the brain of a mammal is wired. #Allen20
Learn more: reuters.com/article/us-scien…
#NeuroTwitter
Lydia Ng retweeted
the only people I’ve seen dismissing this insightful article are ones who don’t seem to understand compression very well
the only surprise(?) is that it took a skilled writer and thinker, instead of one of us researchers, to make the case crystal clear
newyorker.com/tech/annals-of…
Lydia Ng retweeted
Today and tomorrow, the @NIH BRAIN Initiative workshop focuses on unmet needs and emerging imaging approaches to characterizing brain cell types and their connectivity in human and other mammalian brains. Register today! #studyBRAIN nimh.nih.gov/news/events/ann…
Lydia Ng retweeted
So proud of Jazmin as she described our pipeline and the work our spatial transcriptomics team does during one of the team talks during #showcase2022. She was amazing. #LatinXinNeuro #neuroscience #teamscience @AllenInstitute
Lydia Ng retweeted
"You can know the name of a bird in all the languages of the world, but when you're finished, you'll know absolutely nothing whatever about the bird... I learned very early the difference between knowing the name of something and knowing something." -Richard Feynman
Lydia Ng retweeted
Neurophysiology data is so expensive and valuable. Let’s not waste it! Let's share it and reuse it!
Our @eLife paper (elifesciences.org/articles/7…) outlines the NWB software ecosystem for standardizing, analyzing, and sharing neurophysiology data #tweeprint 1/11
Lydia Ng retweeted
We are leading a new global collaboration to map the ~200 billion cells in the human brain by their type and function. @Inside_PM reports.
insideprecisionmedicine.com/… | #neuroscience #studyBRAIN
Lydia Ng retweeted
Announcing massive #Alzheimers disease datasets & tools, generated with @AllenInstitute, @UWMedicine, @UWMedNSI & @KPWaResearch collaborators & supported by @NIHAging, to accelerate research to #endALZ | #OpenScience
alleninstitute.org/what-we-d…
Lydia Ng retweeted
Proof by Clementine: the surface area of a sphere is 4 pi r^2 (trace around widest part of clementine 4 times)
Lydia Ng retweeted
Want to Get Your Brain Pipelined? A brain #registration pipeline packaged in a #reproducible @SingularityApp image with the Common Workflow Language (#CWL) demonstrated by
@picslupenn with ANTsPy: youtube.com/watch?v=KwgkHB7f…
Lydia Ng retweeted
How do you create composable, reproducible HPC processing pipelines? Ivan Cao-Berg from @psc_live @CBI_Pitt explains how to create neuroimage registration pipelines for the Brain Image Library (BIL) #slurm #cwl #singularity youtube.com/watch?v=vDs3Ut0r…
Lydia Ng retweeted
Today at MIT's Information Design class: grizzled veteran @mschifferli tells all the students that parsing data sets is like Tolstoy: “All happy families are alike; each unhappy family is unhappy in its own way.”
Lydia Ng retweeted
Today we published a manuscript with roots that go back to my first days @AllenInstitute. This project afforded me the privilege of working with many talented and devoted scientists, especially @docseeman @lukecampagnola @HongkuiZeng. Thank you one and all for the opportunity.
🧠 Which brain cell types are connected, and what do those connections look like? 🤔 Recording from multiple live neurons simultaneously — our researchers mapped thousands of cortical connections to find out. 🧵 1 alleninstitute.org/what-we-d…
