@whelan_lab

Interested in plant mitochondrial biogenesis and function, phosphate homeostasis and medicinal agriculture. Based at AgriBio, La Trobe University, Melbourne

 Bundoora, Melbourne, Australia
latrobe.edu.au/animal-plant-and-soil-sciences/research/whelanlab
Joined September 2017
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  • Following80
  • Followers297
33Media
Whelan lab retweeted
lewsey lab@lewseylab26 Jan 2022
We built a tool for easy exploration of scRNA-seq data, based on the @Azure platform. It allows you to easily load processed data, query GO and genes of interest, with plant root data as an example. Great collaboration with the @BizData_News team!
n/a@OliverBerkowitz25 Jan 2022
New paper out. Nice app for scRNASeq data exploration scCloudMine: A cloud-based app for visualization, comparison, and exploration of single cell transcriptomic data cell.com/plant-communication…

scCloudMine: A cloud-based app for visualization, comparison, and exploration of single-cell...

The cloud-based application scCloudMine enables visualization and comparison of single-cell transcriptome data and does not require an on-site, high-power computing server, installation, or associa...

cell.com
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Nice work by our bioinfo team and @BizData_News scCloudMine: A cloud-based app for visualization, comparison, and exploration of single cell transcriptomic data cell.com/plant-communication…

scCloudMine: A cloud-based app for visualization, comparison, and exploration of single-cell...

The cloud-based application scCloudMine enables visualization and comparison of single-cell transcriptome data and does not require an on-site, high-power computing server, installation, or associa...

cell.com
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New paper from our lab. 👇👍👌
n/a@OliverBerkowitz19 Jan 2022
New paper out. Great work by Xiangxiang Meng and collaborators Lu Li, Jesus Pascual, @MoonaRahikainen, @yi_changyu, @RicardaJost, @FrankHe19, @adaptiveevolut1, Justin Borevitz, @SaijaliisaK, @Whelanlab Also thanks to the reviewers and editor ! academic.oup.com/plphys/adva…
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👌👍👇
n/a@OliverBerkowitz5 Jan 2022
Nice work by team phenotyping ! Esp. the two PhD students Rijad (Rick) Saric and Viet (Harvey) Nguyen ! @trtjlek @whelan_lab @lewseylab @EddieCustovic authors.elsevier.com/c/1eMr0…
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Diverse phosphate and auxin transport loci distinguish phosphate tolerant from sensitive Arabidopsis accessions @yi_changyu @whelan_lab @RicardaJost #PlantSci doi.org/10.1093/plphys/kiab4…
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Paper accepted ! Nice work @yi_changyu and @RicardaJost, in collaboration with @adaptiveevolut1 #phosphate #auxin #GWAS Diverse phosphate and auxin transport loci distinguish phosphate tolerant from sensitive Arabidopsis accessions academic.oup.com/plphys/adva…

Diverse phosphate and auxin transport loci distinguish phosphate tolerant from sensitive Arabidop...

A series of insertion/deletion nucleotide polymorphisms at PHOSPHATE TRANSPORTER1 and PIN-LIKES7 loci confer natural variation in low phosphate tolerance i

academic.oup.com
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New spotlight article on Pi/As sensing by @RicardaJost from our lab. How sensing arsenite helps plants survive on toxic soils cell.com/molecular-plant/ful…

How sensing arsenite helps plants survive on toxic soils

Metals and metalloids are present in soils and ground water. They constitute both essential plant nutrients and potent poisons. Arsenic (As) is one of the most prevalent toxic compounds in soil with...

cell.com
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Delighted to share our manuscript finally published in @NaturePlants 🥳 Live single-cell transcriptional dynamics via RNA labelling in plant roots during the phosphate response! nature.com/articles/s41477-0…

Live single-cell transcriptional dynamics via RNA labelling during the phosphate response in plants

Nature Plants - A method to label and visualize nascent RNA allows real-time study of transcriptional dynamics at single-cell resolution in vivo. The approach is used to study transcriptional...

nature.com
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Great story finally coming to fruition. nature.com/articles/s41477-0… @NaturePlants
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New paper out. Nice work everyone ! @EddieCustovic @lewseylab @OliverBerkowitz Noninvasive imaging technologies in plant phenotyping sciencedirect.com/science/ar…
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Growing the future of agriculture latrobe.edu.au/news/articles… #latrobeuni via @latrobe

Growing the future of agriculture

Expanded glasshouses and new lab facilities for plant research

latrobe.edu.au
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New standard for paper acceptance cakes Soon out in:
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Whelan lab retweeted
n/a@OliverBerkowitz17 May 2021
Cake today for real. Thanks for all the input Yue Xu @LimCheeLiew @yanwang42947675 Yanqiao Zhu @BhavHurg @lewseylab @whelan_lab RNA‐seq analysis of laser micro‐dissected Arabidopsis thaliana leaf epidermis, mesophyll and vasculature defines... onlinelibrary.wiley.com/doi/…
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Great collaboration!
Plant Physiology@PlantPhys13 May 2021
ACONITASE 3 is part of the ANAC017 transcription factor-dependent mitochondrial dysfunction response #PlantSci #Organelles #AbioticStress @MoonaRahikainen @whelan_lab @guidoduria buff.ly/2Rf1KKt
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Happy to be involved with new paper from @murchalab
Plant Physiology@PlantPhys23 Feb 2021
The mitochondrial AAA protease FTSH3 regulates Complex I abundance by promoting its disassembly #Mitochondria #PlantSci @whelan_lab @OliverBerkowit @murchalab buff.ly/2ZKcHEC
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Congrats to Dr Andreas Hartmann. Last graduation for 2020, what a year it's been. @latrobe
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Hub paper just published: nph.onlinelibrary.wiley.com/… @LTUresearchers #medicinalcannabis @arc_gov_au @lewseylab @NewPhyt

Recent advances in Cannabis sativa genomics research

Cannabis (Cannabis sativa L.) is one of the oldest cultivated plants purported to have unique medicinal properties. However, scientific research of cannabis has been restricted by the Single Conven...

nph.onlinelibrary.wiley.com
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Congrats Dr Changyu Yi. Graduation day @latrobe Together with PhD supervisor @RicardaJost
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Wow, amazing cover. Thanks for having us involved Josh et al !
Joshua Mylne@j_mylne8 Oct 2020
Here's our cover art chosen for the Oct 16 issue of @jbiolchem! Art by the talented @creativehuntau (who'll work for < an APC). ICYMI our paper is about rediscovering some Aussie work done in 1955 on evolidine, the first plant cyclopeptide ever discovered. doi.org/10.1074/jbc.RA120.01…
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New paper from our lab. Well done Yanqiao et al. Conserved and Opposite Transcriptome Patterns during Germination in Hordeum vulgare and Arabidopsis thaliana mdpi.com/849442 Part of Special Issue on Plant Respiration (ed. Greg C. Vanlerberghe) mdpi.com/journal/ijms/specia…
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