@uga_genpapers

Publications from the UGA Department of Genetics. For other news from the Department follow @uga_genetics or https://xitter.cf/t.co/pwbUKEGHwz

Joined August 2018
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The clock in growing hyphae and their synchronization in Neurospora crassa dlvr.it/T8Sxb9

The clock in growing hyphae and their synchronization in Neurospora crassa - PubMed

Utilizing a microfluidic chip with serpentine channels, we inoculated the chip with an agar plug with Neurospora crassa mycelium and successfully captured individual hyphae in channels. For the first...

pubmed.ncbi.nlm.nih.gov
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Perturbation of tonoplast sucrose transport alters carbohydrate utilization for seasonal growth and defense metabolism in coppiced poplar dlvr.it/T85q9N

Perturbation of tonoplast sucrose transport alters carbohydrate utilization for seasonal growth and...

Nonstructural carbohydrate reserves of stems and roots underpin overall tree fitness and productivity under short-rotation management practices such as coppicing for bioenergy. While sucrose and...

pubmed.ncbi.nlm.nih.gov
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WHOLE GENOME TARGETED ENRICHMENT AND SEQUENCING OF HUMAN-INFECTING CRYPTOSPORIDIUM spp dlvr.it/T7sGSD

WHOLE GENOME TARGETED ENRICHMENT AND SEQUENCING OF HUMAN-INFECTING CRYPTOSPORIDIUM spp - PubMed

Cryptosporidium spp. are protozoan parasites that cause severe illness in vulnerable human populations. Obtaining pure Cryptosporidium DNA from clinical and environmental samples is challenging...

pubmed.ncbi.nlm.nih.gov
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Cryptosporidium Genomics - Current Understanding, Advances, and Applications dlvr.it/T7bYy5

Cryptosporidium Genomics - Current Understanding, Advances, and Applications - PubMed

The community's ability to identify genomic targets in the abundant, yet still lacking, collection of genomic data, combined with their increased ability to assess function via gene knock-out, is...

pubmed.ncbi.nlm.nih.gov
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Temporal gene expression during asexual development of the apicomplexan Sarcocystis neurona dlvr.it/T7YvfR

Temporal gene expression during asexual development of the apicomplexan Sarcocystis neurona - PubMed

The genus Sarcocystis is an expansive clade within the Apicomplexa, with the species S. neurona being an important cause of neurological disease in horses. Research to decipher the biology of S....

pubmed.ncbi.nlm.nih.gov
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Protein phosphatase PP1 regulation of RNA polymerase II transcription termination and allelic exclusion of VSG genes in trypanosomes dlvr.it/T7KJY3

Protein phosphatase PP1 regulation of RNA polymerase II transcription termination and allelic...

The genomes of Leishmania and trypanosomes are organized into polycistronic transcription units flanked by a modified DNA base J involved in promoting RNA polymerase II (Pol II) termination. We...

pubmed.ncbi.nlm.nih.gov
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Patterns of genomic variation reveal a single evolutionary origin of the wild allotetraploid Mimulus sookensis dlvr.it/T77WWB

Patterns of genomic variation reveal a single evolutionary origin of the wild allotetraploid...

Polyploidy occurs across the tree of life and is especially common in plants. Because newly formed cytotypes are often incompatible with their progenitors, polyploidy is also said to trigger "insta...

pubmed.ncbi.nlm.nih.gov
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Does Nesting Material Affect Wood Duck (Aix sponsa) Nest Box Selection, Reproduction, and Eggshell Bacteria? dlvr.it/T70ZJW

Does Nesting Material Affect Wood Duck (Aix sponsa) Nest Box Selection, Reproduction, and Eggshell...

Wood Ducks (Aix sponsa) are secondary cavity nesters that use natural cavities and artificial nest boxes, the latter of which has been attributed to the recovery of populations across the southeast...

pubmed.ncbi.nlm.nih.gov
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Computer vision models enable mixed linear modeling to predict arbuscular mycorrhizal fungal colonization using fungal morphology dlvr.it/T6rRrT

Computer vision models enable mixed linear modeling to predict arbuscular mycorrhizal fungal...

The presence of Arbuscular Mycorrhizal Fungi (AMF) in vascular land plant roots is one of the most ancient of symbioses supporting nitrogen and phosphorus exchange for photosynthetically derived...

pubmed.ncbi.nlm.nih.gov
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Cell fusion: Inter-organ tissue communication promotes a union between myoblasts dlvr.it/T6ZVZc

Cell fusion: Inter-organ tissue communication promotes a union between myoblasts - PubMed

Repeated rounds of fusion between apposing myoblasts allow muscles to become multinucleated. New research finds that myoblasts undergoing fusion in the Drosophila embryo respond to hormone signaling...

pubmed.ncbi.nlm.nih.gov
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The first Cryptosporidium meeting: a concerted effort to fight cryptosporidiosis dlvr.it/T6QGT8

The first Cryptosporidium meeting: a concerted effort to fight cryptosporidiosis - PubMed

The first Cryptosporidium meeting: a concerted effort to fight cryptosporidiosis

pubmed.ncbi.nlm.nih.gov
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Elevated [CO2] and temperature augment gas exchange and shift the fitness landscape in a montane forb dlvr.it/T5yYpX

Elevated [CO2] and temperature augment gas exchange and shift the fitness landscape in a montane...

Climate change is simultaneously increasing carbon dioxide concentrations ([CO2]) and temperature. These factors could interact to influence plant physiology and performance. Alternatively, increased...

pubmed.ncbi.nlm.nih.gov
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Microbiome properties in the root nodules of Prosopis cineraria, a leguminous desert tree dlvr.it/T5b76d

Microbiome properties in the root nodules of Prosopis cineraria, a leguminous desert tree - PubMed

We conducted a comprehensive analysis of the total microbiome and transcriptionally active microbiome communities in the roots and root nodules of Prosopis cineraria, an important leguminous tree in...

pubmed.ncbi.nlm.nih.gov
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The effect of global change on the expression and evolution of floral traits dlvr.it/T5Qg7k

The effect of global change on the expression and evolution of floral traits - PubMed

Floral traits evolve in response to multiple interacting agents of selection. Different agents can sometimes exert conflicting selection. For example, pollinators often prefer large flowers, but...

pubmed.ncbi.nlm.nih.gov
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scifi-ATAC-seq: massive-scale single-cell chromatin accessibility sequencing using combinatorial fluidic indexing dlvr.it/T5FwGZ

scifi-ATAC-seq: massive-scale single-cell chromatin accessibility sequencing using combinatorial...

Single-cell ATAC-seq has emerged as a powerful approach for revealing candidate cis-regulatory elements genome-wide at cell-type resolution. However, current single-cell methods suffer from limited...

pubmed.ncbi.nlm.nih.gov
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Higher ratio of plasma omega-6/omega-3 fatty acids is associated with greater risk of all-cause, cancer, and cardiovascular mortality: A population-based cohort study in UK Biobank dlvr.it/T56q6d

Higher ratio of plasma omega-6/omega-3 fatty acids is associated with greater risk of all-cause,...

Research reported in this publication was supported by the National Institute of General Medical Sciences of the National Institute of Health under the award number R35GM143060 (KY). The content is...

pubmed.ncbi.nlm.nih.gov
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A change in cis-regulatory logic underlying obligate versus facultative muscle multinucleation in chordates dlvr.it/T53N9W

A change in cis-regulatory logic underlying obligate versus facultative muscle multinucleation in...

Vertebrates and tunicates are sister groups that share a common fusogenic factor, Myomaker (Mymk), that drives myoblast fusion and muscle multinucleation. Yet they are divergent in when and where...

pubmed.ncbi.nlm.nih.gov
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Cyto-swapping in maize by haploid induction with a cenh3 mutant dlvr.it/T4kmRH

Cyto-swapping in maize by haploid induction with a cenh3 mutant - PubMed

Maize mutants of the centromeric histone H3 (CENP-A/CENH3) gene can form haploids that inherit only chromosomes of the pollinating parent but the cytoplasm from the female parent. We developed CENH3...

pubmed.ncbi.nlm.nih.gov
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Establishment of H3K9me3 is influenced by genomic context and is temporally uncoupled from signal growth during early zebrafish embryogenesis dlvr.it/T4h2pz

The emerging H3K9me3 chromatin landscape during zebrafish embryogenesis - PubMed

The structural organization of eukaryotic genomes is contingent upon the fractionation of DNA into transcriptionally permissive euchromatin and repressive heterochromatin. However, we have a limited...

pubmed.ncbi.nlm.nih.gov
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What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for fungal and oomycete species dlvr.it/T4fH1d

What is new in FungiDB: a web-based bioinformatics platform for omics-scale data analysis for...

FungiDB (https://fungidb.org) serves as a valuable online resource that seamlessly integrates genomic and related large-scale data for a wide range of fungal and oomycete species. As an integral part...

pubmed.ncbi.nlm.nih.gov
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