Open source software for image segmentation, cardiovascular patient specific modeling, and finite element blood flow simulation.

Stanford - UCB
Joined September 2014
Vote for the Vascular Model Repository in the @Iamherox DataWorks! prize finalist round! We provide >150 @simvascular compatible projects for #AI , #precisionmedicine, and medical device design. @StanfordEng @StanfordCORES @StanfordChild @ICMEStanford @WiDS_Worldwide Please RT!
Learn about the 20 DataWorks! Prize finalists and how they have used data sharing or reuse to advance human health. Finalists are eligible for $500,000 prize purse and people’s choice recognition awards. #NIHData #DataScience herox.com/dataworks
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Our Vascular Model Repository (VMR) is in the @Iamherox DataWorks finalist round! VMR provides >150 @simvascular projects for #AI , #precisionmedicine, and device design. @StanfordEng @StanfordCORES @StanfordChild @ICMEStanford @WiDS_Worldwide Vote here! herox.com/dataworks
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Congrats lab members @schwarzish @zinanhu and @mpfaller for their outstanding talks at #svim2022 on topics from vascular growth and remodeling to multi physics simulations for single ventricle physiology. Fantastic interdisciplinary meeting organized by @AdditionalVent.
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It was a big week for @suhaasaz! Not only did he make the cover of @NatureCVR but he successfully defended his dissertation today! Fun celebration with co-advisor @kristyredhorse and our two labs. Congrats Dr. Suhaas!!
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Interdisciplinary science at its best! Excited to have been part of this collaboration with @kristyredhorse and our joint student @suhaasaz combining computational modeling and developmental biology to study coronary collaterals! @StanfordChild @StanfordCVI @ICMEStanford
Excited to wake up at our lab retreat to this beautiful cover designed by @suhaasaz and @pamr33, not only top scientists but also artists! #proudsciencemom Read the paper here: rdcu.be/cTyrx
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The July 2022 @simvascular release is now up! Installers can be found for Linux, Mac, and Windows simtk.org/frs/index.php?grou… and provide several bug fixes mentioned in the 🧵below. Great work out of @MarsdenStanford for continued #OpenScience
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Bug fixes for svFSI: - Fixed ✅creating results folder with verbose set (#77) - Fixed ✅ SETBC.f errors (#57) - Fixed ✅ memory allocation error in CMM - Added 🆕 unconstrained HO-ma model
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Bug fixes for Purkinje Plugin: - Fixed ✅ conflicts with previous install versions
Congratulations to Tran et al for winning the best short paper with their work on the "SimVascular Gateway for Education and Research" Another terrific example of #OpenSource science dl.acm.org/doi/abs/10.1145/3…
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Just out from postdoc Jongmin Seo and @abhay_br in Seminars in Thoracic and Cardiovascular Surgery "Computational Evaluation of Venous Graft Geometries in Coronary Artery Bypass Surgery" using @simvascular sciencedirect.com/science/ar…
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Thrilled to announce that "SimVascular Gateway for Education and Research" has been awarded best short paper in the Workforce Development, Training, Diversity and Education track in the upcoming 2022 @PEARC_Conf ! Another example of impactful #opensource science
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Exciting new work from the LaDisa Lab and @MarquetteU in "A Pilot Study Characterizing Flow Patterns in the Thoracic Aorta of Patients With Connective Tissue Disease: Comparison to Age- and Gender-Matched Controls via Fluid Structure Interaction" frontiersin.org/article/10.3…
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🚨🚨 Our abstract submission platform host is experiencing a nationwide outage - please check back soon for an update! 🚨🚨 In light of these issues, our #SVIM2022 abstract submission DEADLINE IS EXTENDED until Sunday, May 22nd at 11:59 PM Pacific Time
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Today marks the deadline for early registration for #SB3C2022! Don't miss out! You can register at sb3c.org/registration/ @asmebedstudents @ASMEJournals @Clyne_Lab @mattbfish @drlwilliams @joaosoaresphd @spence_sz3 @ZhenpengQin
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Don't forget! Today is the last day for early registration @SB3Corg deadline 11:59pm PST. On June 23 will be leading hands-on tutorials with our open-source software. You can resister for this workshop when completing your conference registration. sb3c.org/registration/
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Don't forget to register for the @simvascular workshop at the @SB3Corg conference June 23rd. We will be doing tutorials and hands on training, appropriate for new and advanced users. Early registration ending soon. sb3c.org/registration/sb3c-p…