Assistant Professor @ Department of Computer Science & Engineering and Huck Institutes of Penn State; #bioinformatics, #algorithms
State College, PA
Joined June 2015
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Mingfu Shao retweeted
📢 We are thrilled to announce the keynote speakers for #RECOMB2026:
🧬 Sara Mostafavi
🧬 Manolis Kellis
🧬 Paul Medvedev
🧬 Alexandros Stamatakis
Join us in Thessaloniki for inspiring talks from leaders in computational biology.
Sequence analysis has long relied on combinatorial optimization, but recently have seen rapid progress driven by ML and AI. Algorithms for Molecular Biology is now inviting submissions on this exciting frontier. Deadline: Feb 16, 2026; more info: bit.ly/4koHZrF
Mingfu Shao retweeted
@GarmireGroup, Joshua Levy (Cedars-Sinai) and myself are organizing a workshop on "Advances of AI methods in single cell spatial omics" at PSB2026. Check out our workshop website to submit an abstract: sites.google.com/view/ai-spa…
Mingfu Shao retweeted
Looking forward to it!
** New Symposium Alert **
We are organizing the first Spatial Omics Symposium in Georgia - and would like to invite you to join us on April 23, 2025.
The vision is a Spatial Consortium for Omics & Patient-Centered Excellence (SCOPE)
SCOPE web: sites.gatech.edu/scope/
Abstract submission deadline of GLBIO 2025: the coming Monday (March 3rd). Check out the amazing lineup of keynotes: iscb.org/glbio2025/programme…
Mingfu Shao retweeted
If you’re looking for a chance to share your research, #GLBIO2025 is the perfect opportunity!
Submit your abstract by Monday, March 3
📥Click here to submit: s.mtrbio.com/rbfbyomaeg
Mingfu Shao retweeted
🔔Don't forget! Proceedings papers for #GLBIO2025 are due Monday, February 3!
📥Submit here: t.ly/T1MOI
Mingfu Shao retweeted
🚨 Keynotes at RECOMB-seq 2025! 🚨
🌟 Alicia Oshlack – computational transcriptomics @AliciaOshlack
🌟 Rayan Chikhi – sequencing data structures @RayanChikhi
🗓️ Dates: April 24–25, 2025
📍 Seoul, South Korea
recomb-seq.github.io/speaker…
check out GLBIO 2025: proceedings submissions due Feb 3, 2025. Proceedings papers will be published in Bioinformatics Advances.
🔔 Reminder: Proceedings paper submissions for #GLBIO2025 are due February 3, 2025!
📥Submit your work or find out more: t.ly/X1WB5
#Bioinformatics #ComputationalBiology
Mingfu Shao retweeted
🚨 Call for Papers: RECOMB-seq 2025 🚨
🗓️ Dates: April 24-25, 2025
📍 Location: Seoul, South Korea
Key deadlines:
🔹 Abstract registration: Jan 24, 2025
🔹 Submission: Jan 31, 2025
More details: recomb-seq.github.io/papers/
Mingfu Shao retweeted
Penn State CSE is hiring in all areas! Feel free to let me know if you have any questions. academicjobsonline.org/ajo/P…
Mingfu Shao retweeted
Calling all brilliant minds! The CSE department at Penn State is looking for the next generation of faculty trailblazers. Join us for inspiring research, top-notch facilities, and a community that’s as driven as it is welcoming. Your next adventure starts here! @PennStateEECS
Penn State CSE is hiring in all areas! Feel free to let me know if you have any questions. academicjobsonline.org/ajo/P…
Check out the incredible lineup of talks at WEMSA 2024: ccbb.psu.edu/workshop2024/. There is still time to submit posters by 7/20/2024 via forms.gle/S1D5Uy1rLmfwB4JU7.
Mingfu Shao retweeted
Last year, a lot of people seemed to appreciate a cleaner schedule of #ISMB2024 so I updated it this year
ismb-schedule.luispedro.org/
The presence of my lab at #ISMB2024 is two proceedings paper presentations and two poster presentations:
@QianShi15 will present proceedings paper “Accurate assembly of multiple RNA-seq samples with Aletsch” at #iRNA, Saturday 2:20pm; 1/2
Xiaofei Carl Zang will present poster B-126 “Anchorage accurately assembles full-length anchor-flanked synthetic long reads” at #HitSeq, Saturday;
Zhezheng will present poster A-117 “Accurate detection of tandem repeat in error-prone long reads” at #HitSeq, Sunday.
Reminder: the abstract submission deadline is tomorrow 6/28/2024
Excited to announce the Workshop on Emerging Methods for Sequence Analysis (WEMSA’24) at Penn State on Aug 9, 2024! Keynotes by Zhiping Weng & Ben Raphael. Submit your work by June 28. Free registration. Details: ccbb.psu.edu/workshop2024