@sara_potente

PhD student in Bioinformatics at University of Padua. Interested in genomics and cancer biology. 🧬

 Padua, Veneto
Joined March 2024
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Benchmarking large-scale single-cell RNA-seq analysis biorxiv.org/content/10.1101/… #biorxiv_bioinfo

Benchmarking large-scale single-cell RNA-seq analysis

The increasing size of single-cell RNA sequencing (scRNA-seq) datasets poses major computational challenges. This work benchmarks the scalability, efficiency, and accuracy of five widely used...

biorxiv.org
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SAMURAI, our CNA detection pipeline for shallow WGS, is now published in @BriefingBioinfo! 🎉 My first first-author publication! Check out our work here ⤵️ academic.oup.com/bib/article… #bioinformatics #CNA #WGS @LabRomualdi @gstarwind

SAMURAI: shallow analysis of copy number alterations using a reproducible and integrated bioinfor...

Abstract. Shallow whole-genome sequencing (sWGS) offers a cost-effective approach to detect copy number alterations (CNAs). However, there remains a gap fo

academic.oup.com
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Excited to introduce SAMURAI: our new standardized #bioinformatics pipeline for uncovering copy number alterations (CNAs) from shallow whole genome sequencing! Check out the preprint: biorxiv.org/content/10.1101/… Looking forward to your feedback! @LabRomualdi @gstarwind

SAMURAI: Shallow Analysis of Copy nuMber alterations Using a Reproducible And Integrated bioinfor...

Shallow whole-genome sequencing (sWGS) offers a cost-effective approach to detect copy number alterations (CNAs). However, there remains a gap for a standardized workflow specifically designed for...

biorxiv.org
bioRxiv Bioinfo@biorxiv_bioinfo1 Oct 2024
SAMURAI: Shallow Analysis of Copy nuMber alterations Using a Reproducible And Integrated bioinformatics pipeline biorxiv.org/cgi/content/shor… #biorxiv_bioinfo
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Congratulations for Poster Award Winners! Claudia Beraldo @cla_beraldo Sara Potente @sara_potente Aurora Maracani @aurora_maracani Thank you to all the participants of #DiBioRetreat2024!
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