Joined April 2021
New book "Explanation in Biology" w Cambridge University Press is out & open access! Covers (1) causal explanation & (2) non-causal/mathematical explanation in life sciences--bio, neuro, etc 🌿🧬🧠 Intro to philosophical work on scientific explanation! cambridge.org/core/elements/…
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Did we ever determine the exact amount of shame you need to feel about still listening to If You're Feeling Sinister once a week
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As promised, here is the registration link and some more info! If you'd like to sponsor this, please reach out! tinyurl.com/ASCBSANDBOX
Mark your calendars: Still finalizing details but I’m putting together an “EVERYBODY’S IN SAN DIEGO!” pre-ASCB workshop at UCSD December 13th from ~10-5:30. This workshop will highlight leaders in cryoEM/ET, mass spec, & light microscopy and AI. Registration link to follow soon.
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How do we judge whether a particular experiment is 'pursuitworthy'? What factors need to be considered? @_EnnoFischer & I are receiving submissions exploring these & related questions for a topical collection @EuroJPS! RTs are widely appreciated! tu-dresden.de/gsw/phil/iphil… #philsci
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When I ran my first agarose gel 175 years ago I was all like this janky ass contraption will be obsolete in six months there is no way this is how a high tech field handles DNA
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Finally out in @ScienceMagazine! Utilizing the cost-effective EasySci to profile 21 million single-cell transcriptomes across five life stages and diverse sexes/genotypes, we reveal aging as distinct, development-like transitions, with dramatic cell population changes in specific time windows. We also demonstrate how highly scalable single-cell genomics enables "Functional Cell-omics" to unravel Cell Regulatory Networks at the whole-organism scale. Congratulations to the incredible Zehao Zhang (@Tommyz626) from our lab @RockefellerUniv for leading this work! science.org/doi/10.1126/scie…
What if 1 million scRNA-seq libraries can be prepared within $1k? Here we go 👉 21 million cells from 623 mouse tissues, spanning 5 life stages & 3 genotypes, all in a SINGLE study by ONE remarkable student Zehao @Tommyz626 from our lab @RockefellerUniv! shorturl.at/epsz7
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My student Julie's pre-print on generalized cell phenotyping for spatial proteomics is finally out! Julie's work integrates large-scale image labeling and language-informed vision models to enable accurate and general cell phenotyping. biorxiv.org/content/10.1101/…
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There is a PhD position available in Copenhagen that will use STS methods to look at expertise and expectations in the energy transition. efzu.fa.em2.oraclecloud.com/…
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40 years since the Heidelberg genetic screen that revolutionized developmental and cell biology Read this Perspective article from Mark Peifer @peiferlabunc, revisiting the genesis of the Heidelberg screen and the stories behind the experiments: journals.biologists.com/dev/…
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Job opening: Assistant Professor in Early Modern Philosophy at UC San Diego. apol-recruit.ucsd.edu/JPF041…
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“Radick recounts every twist and turn of the debate, and his account of the Bateson-Weldon stand-off is surely definitive”: Lorraine Daston on DISPUTED INHERITANCE in the London Review of Books – lrb.co.uk/the-paper/v46/n21/…
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Vanderbilt FIRST program is hiring! They are also interested in broad areas in biology, including neuroscience, genetics and imaging! apply.interfolio.com/151173
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How I woke up one day and decided to solve a math conjecture from the 1970s ⤵️
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We are closing out #NationalChemistryWeek – and celebrating #FluorescenceFriday -- with one of the newest biosensors developed @HHMIJanelia: WHaloCaMP – the first demonstration of a new strategy for making fluorescent biosensors for imaging physiology. 🔗janelia.org/news/new-biosens…
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The vocabulary of systems neuroscience may appear daunting to many. Here's a short dictionary of common terms. BTW if you use them in your papers and grants you will have greater success
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🚨Big news! Five years in the making, our Zebrahub paper is now published in #Cell 🎉. We’ve built a timecourse atlas of zebrafish embryonic development, combining #scRNAseq data and #lightsheet live imaging, and delved deep into the dynamics of key progenitors. cell.com/cell/fulltext/S0092… Explore the datasets here: zebrahub.sf.czbiohub.org Led by @Merlin_Lange with key contributions by @ale_agranados, @Shruthi94Vijay, @jobragantini, @Sarah_E_Ancheta and @yangjoonkim #zebrahub #devbio #cell #Biology #imaging @CellCellPress @czbbiohub #CZBiohubS
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3/ 🌟 Why is #inTRACKtive a game changer? It enables researchers to visualize, analyze, and share cell-tracking datasets – all in real-time, in your browser, without downloading a single file. You can select specific cells or groups of cells and trace their lineages interactively through time, perfect for virtual fate-mapping experiments! 💻📊 #CellTracking
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