RNA representation learning, deep learning for RNA biology & RNA theraputics. Passionate about graph ML.

Helmholtz Center Munich (DE)
Joined July 2017
Don't miss your chance to apply!
⏳ Only 10 days left to apply for our Principal Investigator in Computational Biomedicine position! Don't miss the chance to drive cutting-edge AI & big data research in health with us @HelmholtzMunich @CompHealthMuc . Apply now! 🚀 📅 Deadline: Feb 24
🔗 bit.ly/4gwXFrh
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Feeling extremely proud of my PhD student for defending his thesis successfully today! and for pioneering the development of high-resolution predictive models of protein-RNA interactions. Toast to @marc_horlacher and to a brilliant career ahead!
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New from our lab (from @tobiasbernecker and Ghalia Rehawi): ARROW-Diff (AutoRegressive RandOm Walk Diffusion), a fresh approach for efficient graph generation. Looking forward to apply it to gene regulatory networks and biomolecule design. Check it out: tinyurl.com/5xbf7pjn
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annalisa marsico retweeted
Great news in our Club! We are thrilled to announce that @siTOOLsBiotech, based in Munich, is a new sponsor of our club. Thank you for your support! And news don't come alone! We have a brand new webpage! munich-rnaclub.de
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annalisa marsico retweeted
Join us in our next #MunichRNA20N! 📍 @MPI_Biochem 📅 20/11/2024 We will hear great science from @jamieccy Chan (@CarellGroupLMU), Marcela (@LabConti), @lara_althaus (@AnneDueck lab), and Lisa (Heissmeyer lab). Don't miss it! 🍕😀
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annalisa marsico retweeted
Please retweet 🙏: 2 @ERC_Research-funded Post-doc positions are available in our lab to investigate #RNA structural ensemble and their dynamics in living cells. Application link: rug.nl/about-ug/work-with-us…
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Andreina Tirabassi, PhD student in our lab, talking about foundation models for functional classification of lncRNAs - a huge, but way too interesting, challenge! #ncRNA2024 @HelmholtzMunich #womeninAI
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Artem from our lab presenting, for the first time, #gASOline , our tool for antisense oligonucleotide design leveraging RNA foundation models at #ncrna2024 in Basel.@FrogToadson @CompHealthMuc . Very grateful for all the biological insights on that!
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feeling particularly proud of our latest microRNA paper today @bulutkarslioglu @lambosaur and of my favourite (post-doc) paper from my time @VingronLab the PROmiRNA model tiny.cc/bh8pzz
Replying to @lisamar2017
Our reconstructed networks allows to pinpoint those miRNA that are central to the diapause complex regulation, and the perturbation of the network compromises embryo survival in diapause.
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if you are passionate about the therapeutics of the future and want to be part of the 'RNA revolution' apply for this project in our lab: we want leverage the latest AI models for the prediction of potential small molecules targeting RNAs in the cell! t.ly/BjO5o
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Join us for an exciting afternoon of RNA talks (including @ggiuliacantini from my lab) on the 10th of July at MPI for Biochemistry! We will celebrate summer with some pizza and drinks afterwards @CompHealthMuc @MunichDS
Munich RNA Club - Summer Edition! #MunichRNA10J Come hear the exciting research from Selay (Nedialkova lab), Jakob (@kusterlab), Riccardo (Rad lab) and Giulia (@lisamar2017 lab)! 📅10/07/24 3pm 📍@MPI_Biochem
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Dormancy is crucial for adult stem cells and embryonic cells during diapause, involving complex molecular alterations. We are thrilled to present our latest paper from the @bulutkarslioglu and Marsico lab @genomeresearch t.ly/li8xD led by Dhanur Iyer and @lambosaur
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Our reconstructed networks allows to pinpoint those miRNA that are central to the diapause complex regulation, and the perturbation of the network compromises embryo survival in diapause.
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'we predicted and validated the TF TFE3 as an upstream regulator of diapause-specific miRNAs. This discovery bridges the gap between cytoplasmic MTOR activity and nuclear miRNA biogenesis, unveiling an intriguing link in the molecular mechanisms of embryonic dormancy.
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It was a great day, thanks to both my group and Lara's group for the great effort you put in the organizaiton of the sicentific part, as well as the sangria and the awesome cakes!
Awesome @CompHealthMuc @helmholtz_ai @HelmholtzMunich lab afternoon by @lisamar2017's and my research groups; we had a lot of fun presenting our research and showing our new building. Thanks heaps to both groups, you are awesome 😍 @Health_talents @helmholtz_en @helmholtz_de
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We are looking forward to our RNA saloon this afternoon! Great talks and speakers lined up
Looking forward to the amazing talks this afternoon by @robert_ife lab, @Sattler_lab, and our invited speaker @KatLeppek ! Will you miss them? Don't forget to register: docs.google.com/forms/d/1RyG…
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annalisa marsico retweeted
Job alert. Please RT 🚀 PostDoc position in the Schneider lab, Munich 🚀. Join us to tackle the next big questions in epigenetics at the single cell level in a collaborative, international & supportive environment 👇🏾 tinyurl.com/ife-postdoc
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Cool to see this out!
Our species-aware DNA Language model is now out at @GenomeBiology! Thumbs up to @AlexKarollus, Johannes Hingerl @thisisjohahi, and Dennis Gankin. Final paper: doi.org/10.1186/s13059-024-0…
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