Associate Principal Scientist @ BI | Opinions are mine | Bioinformatician • Molecular Biologist • Data Scientist | Enjoying lifting heavy things & coffee

Vienna, Austria
Joined October 2015
I am very happy to share I have just started a new position as Associate Principal Scientist @Boehringer!
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Following up on the previous post, we also just released another chapter, focusing on #RNASeq secondary analysis. Here we talk about which aligner is the right one for your project, how to perform #UMI based read collapsing and how to quantify your reads!
We have prepared something really cool for you - a few chapters from our #Lexicon - #RNASeq educational tool focusing solely on Data Analysis and Quality Control. Want to find out more about Secondary Analysis? Click here: bit.ly/35jY9l0 Happy learning!
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Do you want to learn more about #RNAseq #dataanalysis but don't know how to get started? If so check out this chapter of our #RNA #Lexicon for a crash course on primary data analysis. This is a nice introductory piece some colleagues and me put together.
We have prepared something really cool for you - a few chapters from our #Lexicon - #RNASeq educational tool focusing solely on Data Analysis and Quality Control. Want to find out more? Click here: bit.ly/3JwSbfq Happy learning!
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One of my old colleagues @gmivienna finished this nice piece! After being involved for some time at the early beginnings, I am happy to see into what this project developed!
I'm happy to finally share a tool I've been working on and the centerpiece of my PhD with @mnodine1. I'm especially excited for its potential to accurately annotate transcript isoforms from rare tissues and single-cell datasets. Bookend: A Thread 🧵 (1/14) biorxiv.org/content/10.1101/…
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We have a new cool product for which I wrote some software. If you are interested in high throughput screening, go check this out! Also check out the tool at: github.com/lexogen-tools/ide…
Our new QuantSeq-Pool kit combines sample barcoding and early pooling with the other benefits of the #QuantSeq 3’ mRNA-Seq, saving your time and costs! Join our webinar next week, September 9, to find out more. Register now: bit.ly/3gLm6BH #LexogenWebinar #RNAseq
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Tired of tedious gel extraction and wasting your sequencing reads on non-functional small RNAs? We are happy to introduce you to our new #TraPR kit for the isolation of functional #smallRNA: bit.ly/2zdYE0l #weloveRNA #sRNAisolation
My colleague is giving a cool webinar. Check it out!
Join our @GenomeWeb #RNAseq #webinar with Jorge Zepeda (Lexogen) and Jean Lozach (@OnrampBio) to find out more about Integration of 3’#mRNAseq and ChIP-Seq Datasets to disentangle Redundant Epigenetic Regulatory Mechanisms on June 18. Follow the link: bit.ly/2AN9URF
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One day left to register for Lexogen’s and @BlueBeeGenomics #webinar about user-friendly data analysis for cost-efficient and streamlined #RNAseq that will make your work much easier! Hurry up and register here: bluebee.lpages.co/lexogen-we… #RNAseq #RNASequencing #WeLoveRNA
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Lexogen and @BlueBeeGenomics are excited to announce the release of a newly formatted and easy-to-use interface for Lexogen’s #RNA-Seq data analysis on the BlueBee platform. Join our webinar on June 9 to learn more and register here: bit.ly/2MkTFhf #RNAseq #webinar
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We are online with our #COVID19 @SpaceApps #QuietPlanet project! Great work by @SayanSoos @_poehlmann @bpaassen1 and Zam from the #CovidNeinTeam. Turning data changes during the #pandemic into sound. Check it out! #NASA #SpaceApps thesoundofsilence.biz
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Remote hacking for #SpaceApps with @falkohof @SayanSoos @bpaassen1 and more 🚀📡🛰️ #CovidNeinTeam #QuietPlanet
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Come and talk to us on zoom!
Our #RNA2020 team from Lexogen will be available for a Live chat today (1pm - 5pm GMT). Join us on @zoom_us bit.ly/2yyeF0C We are looking forward to learning about your projects and introducing our solutions! #virtualevent #livechat #weloveRNA #RNAseq #RNAsequencing
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Great talk by my colleague @ebirn about our CICD pipeline for containerized applications ! #DevConf_CZ – at Brno, Czech Republic
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Such a nice evening in the Wiener Rathaus celebrating 25 years of the Vienna BioCenter PhD Programme #VBCPhDSymposium
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Magnificent location to celebrate 25 years @TrainingVbc @VBCPhdSymposium #VBCPhDSymposium
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We finally edited & uploaded our #SpaceApps pitch video. Thanks to @_poehlmann @ebirn @timeu_s @sergeantsalty @erolgalip for their contributions and the fun time. Also thanks to @SpaceAppsVienna & @SpaceApps for organizing this great event! Check it out! youtu.be/wqW8dvErmE8
We got our 30s #SpaceApps video ready in time youtu.be/wqW8dvErmE8 and now we'll have to 🤞🤞🤞. Made so many new friends and learned so much! Thanks for organizing this awesome event @SpaceApps @SpaceAppsVienna 🛰️ I'll be browsing the global nominee project pages now 🥳
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Use our @Nasa @SpaceApps hackathon prototype to collect all #Starlink satellites: majortom.outdated.at 🛰️👩‍🚀📡👨‍🚀 Can you collect them all? #SpaceApps @elonmusk @timeu_s @falkohof @ebirn @erolgalip #PatrickHatKeinTwitter
Sending this tweet through space via Starlink satellite 🛰
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We won the local space apps challenge in Vienna @SpaceAppsVienna ! Wooohoo 🛰️📡🚀🚀👨‍🚀👩‍🚀 such an awesome event! So glad we could participate 😊🤗 play with our prototype at majortom.outdated.at @NASA @SpaceApps @timeu_s @falkohof @ebirn
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Hackedy hack with the Phoenix Foundation at the #SpaceApps Challenge Vienna
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