This is the official Twitter account of DANIO-CODE, an international collaborative effort that aims to annotate the functional elements of the zebrafish genome.
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ALT black and white line genome browser track lines forming different developmental stages of zebrafish in the style of the album cover unknown pleasure by joy division.
ALT List of research highlights: Highlights • 1,802 samples, 38 stages, 38 labs, 19 assay types • precise TSS, alternative promoters, promoter architecture classes • developmental TF activity-qualified TFBS prediction • >140,000 cis-regulatory elements, single-cell based cell-type specificity • new visualisation of epigenetic profiles, new functional subclasses • H3K27ac-rich ensembles support early expression of developmental factors and long-range regulation • vertebrate epigenomic landscape conservation by anchored projection tool • vertebrate regulatory element equivalence without sequence conservation
ALT Screenshot of the title and authors of the paper.
ALT bubble chart of all available datasets per zebrafish stage
ALT black and white line genome browser track lines forming different developmental stages of zebrafish in the style of the album cover unknown pleasure by joy division.
ALT List of research highlights: Highlights • 1,802 samples, 38 stages, 38 labs, 19 assay types • precise TSS, alternative promoters, promoter architecture classes • developmental TF activity-qualified TFBS prediction • >140,000 cis-regulatory elements, single-cell based cell-type specificity • new visualisation of epigenetic profiles, new functional subclasses • H3K27ac-rich ensembles support early expression of developmental factors and long-range regulation • vertebrate epigenomic landscape conservation by anchored projection tool • vertebrate regulatory element equivalence without sequence conservation