Diving into the deep end again (AI+Health)

California, USA
Joined March 2008
Christine Lemke retweeted
What if, for any scientific claim, you can search 100M+ papers to find the strongest evidence for and against it ⚡️in 1 second? That’s now possible with Evidence API! 🚀 paperclip.gxl.ai/evidence-ap… For example, does drinking coffee reduce diabetes risk?
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Christine Lemke retweeted
Try our new (very fast) Evidence API that returns supporting/refuting evidence for any scientific claim. In ~ 1s, you can: - Get citations to back up claims in your Intro and Related Works sections - Look up whether certain health claims are grounded in literature - Test autoresearch hypotheses at scale - etc. etc. etc.
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re:AGENT was oversubscribed in August, so we're throwing another one at JPM in January. Save the date!
Save the date: re:AGENT is back! @GXL is hosting re:AGENT II, the hackathon for agentic science. The two-day build, from January 9th-10th, kicks off JPM week in San Francisco. Want to build or sponsor? Fill out the interest form in the comments Questions? Reach out to [email protected]
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Exciting team and vision. Congratulations on the launch @OrtetAI !
i'm co-founding @OrtetAI to create continuously improving intelligence for every patient. we're hiring! please join the Ortet crews - @kchonyc @HenriDwyer @elmanmansimov @causalclaudia - more on ortet.ai
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Christine Lemke retweeted
Nice @nytimes article discussing our AI scientist agents research! nytimes.com/2026/09/17/well/…
Super excited that #VirtualBiotech is published in @ScienceMagazine today! Tens of thousands of AI scientist agents work together across drug discovery + development, from target discovery to clinical trial design. Our blueprint for agentic R&D 🧵
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Christine Lemke retweeted
🔥 Excited to share that #paper2agent is published in @Nature today! Papers have long been the primary format for communicating scientific knowledge, but they remain static. Putting that knowledge to work requires connecting findings to data, navigating supplementary materials, and adapting methods to new questions - effort repeated by each new reader. We introduce Paper2Agent, a multi-agent framework that automatically turns research papers into virtual authors. Paper2Agent turns a paper’s manuscript, code, data, and supplements into an MCP server that any AI agent can access, with automated testing and iterative refinement in an agentic loop. The paper then becomes a virtual author you can talk to: trace claims to evidence, analyze your own data, and collaborate with other papers’ virtual authors Agentifying a paper turns it from something people read into something people and AI agents can discover and build on - providing the context needed to interpret its findings and reuse its methods reliably. We tested how reliably these agents put papers to use. Across multiple benchmarks, agents created by Paper2Agent outperformed baselines such as Claude Code working directly with papers' PDFs and code repositories. Once papers become virtual authors, they can collaborate - much like human researchers do. In one case study, agents built from AlphaGenome and two large-scale genetic perturbation studies worked together to propose a new computational approach for integrating evidence across different perturbation datasets. By connecting predictions from one paper with experimental data from others, they helped pinpoint a likely causal gene for psoriasis. We hope Paper2Agent makes scientific knowledge easier to access, reuse, and build on - a first step toward a future where millions of paper agents proactively collaborate with human researchers and one another to advance discovery. 🤖Talk to the virtual author for Paper2Agent itself: paper2agent.ai 📎Paper: nature.com/articles/s41586-0… 💻Code: github.com/jmiao24/Paper2Age… VERY grateful to work with this incredible team: @james_y_zou, @jkpritch, Yaohui, and Joe!
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Yes.
in the first chapter of healthcare AI, the battleground was access to longitudinal clinical data. in this next phase, it will be access to biological specimens: tissue, blood, synovial fluid, and other samples containing 1,000× more information, linked to clinical context and longitudinal outcomes. the winners will be those who can access, assay, and interpret these specimens at the lowest cost and highest resolution.
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Fun thing from the @gxl_ai team today, check out Paper Scorecard: paperclip.gxl.ai/scorecard/
Your paper is cited 200 times. Maybe 8 of them actually read it. Paper Scorecard finds those 8 and surfaces the real critiques buried in literature. Fascinating to see what papers really say about each other! paperclip.gxl.ai/scorecard/
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Christine Lemke retweeted
Your paper is cited 200 times. Maybe 8 of them actually read it. Paper Scorecard finds those 8 and surfaces the real critiques buried in literature. Fascinating to see what papers really say about each other! paperclip.gxl.ai/scorecard/
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Christine Lemke retweeted
the science of science community is sleeping on this. #paperclip is going to be awesome for metascience/innovation studies!
Over 1.8 million full text patents and 170 million abstracts are now on #paperclip! All indexed in the same agent-native filesystem w/ millions of papers, so you can easily search across literature + patents. Most drugs are first disclosed in patents so this is very useful! Great examples and use cases in this blog gxl.ai/blog/adding-patents#a…
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Full text patents are now in @gxl_ai Paperclip!
Over 1.8 million full text patents and 170 million abstracts are now on #paperclip! All indexed in the same agent-native filesystem w/ millions of papers, so you can easily search across literature + patents. Most drugs are first disclosed in patents so this is very useful! Great examples and use cases in this blog gxl.ai/blog/adding-patents#a…
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Christine Lemke retweeted
We added 170M+ patent publications to Paperclip! Most publicly disclosed compounds are first reported in patents, not papers, often several years before they appear in the scientific literature. Patents also contain useful experimental detail that goes beyond the published literature. However, patents are written to establish legal claims, which makes their scientific content difficult to analyze systematically. What's now indexed: - 170M+ patent titles and abstracts across 75 jurisdictions - 1.8M full-text drug patents, with claims and descriptions - 30M compound annotations linked to individual patents In the blog post, we walk through examples of what this enables, from mapping competitive compound landscapes to extracting developability data like aggregation rates and formulation fixes directly from patent descriptions. Agents using Paperclip can now search and read this information alongside scientific papers, regulatory documents and clinical trials. Try it here: paperclip.gxl.ai/ Read more: gxl.ai/blog/adding-patents
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Still going strong!
That's a wrap on Day 1 of the re:Agent Hackathon 2026!! 20 jugs of coffee, 100+ bagels, 300+ bags of chips, 14 cases of cold brew, and 18 boxes of pizza later, 64 teams are heads-down and building. Tomorrow we kick off the morning with a stacked panel bringing together five leaders across AI, biotech, and life sciences: Christine Lemke, CEO, GXL Kexin Huang, CEO, Phylo Nicholas Larus-Stone, Head of AI, Benchling David Garfield, Anthropic Life Sciences Deniz Kavi, CEO, Tamarind Bio Final builds, demos, and live judging all go down tomorrow. Can't wait to see what everyone ships!!! #reAgent2026
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The re:Agent Hackathon in SF is 🔥 Kick off in 20 minutes!
Excited to announce re:AGENT a two-day build weekend (8/15–8/16, SF) for people building tools for scientific agents. Three tracks: A) Build an AI scientist that can carry out a workflow from start to finish B) Design a new biological system from the ground up C) Create a dataset at scale to answer a question you've never been able to read fast enough to settle. What you leave with is the working thing, not a pitch deck. Apply by 7/30 at luma.com/g6org075
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Christine Lemke retweeted
Paperclip for molecular databases is way faster (and hallucination-resistant) than using existing APIs. We had to re-index much of the data from the ground up, and I think it's very worth it :)
Bio databases/APIs weren't designed for AI agents🧬 So we expanded #Paperclip to transform common molecular databases—UniProt, PDB, ChEMBL—into a unified agent-native virtual filesystem. Now you can do deep research across 10^6 molecules much more accurately and 10x faster! All integrated with millions of full-text papers also indexed in Paperclip. Free to use gxl.ai/blog/adding-biology-d…
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Christine Lemke retweeted
Bio databases/APIs weren't designed for AI agents🧬 So we expanded #Paperclip to transform common molecular databases—UniProt, PDB, ChEMBL—into a unified agent-native virtual filesystem. Now you can do deep research across 10^6 molecules much more accurately and 10x faster! All integrated with millions of full-text papers also indexed in Paperclip. Free to use gxl.ai/blog/adding-biology-d…
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Christine Lemke retweeted
Excited to introduce Paperclip Chat!🖇️ Now you can use #Paperclip directly in your browser for deep literature synthesis for free ⚡️ Each claim is grounded with inline citations ⚡️ Upload your own PDFs. They're automatically integrated into Paperclip's virtual filesystem
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Christine Lemke retweeted
Paperclip is now in your browser. Today we're releasing Paperclip Chat, an instant, browser-based way to search and analyze millions of full-text papers, clinical trials and regulatory documents with no local setup. Paperclip contains every feature of the initial CLI, plus: - Inline citations - Repo visualization: see your research as a graph: click through each branch, inspect verified claims, full observability into every conclusion - A workspace where you can upload your own documents Try it → paperclip.gxl.ai/chat More → gxl.ai/blog/announcing-paper… Paperclip original CLI → paperclip.gxl.ai
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I used @gxl_ai paperclip.gxl.ai to analyze the @midjourney announcement, and it evaluated it a B+ idea, which is pretty good! Full report with citations here: drive.google.com/file/d/11G5…
On the @midjourney "Full Body Scanner" A nice idea that could add to our imaging capabilities, especially building on the power of ultrasound. But it's not full body. You can't use ultrasound to image the brain. My published smartphone ultrasound medical selfie in 2018 science.org/doi/10.1126/scit… Moreover, there are the same concerns about incidentalomas as with full body MRI. And we've yet to see a publication.
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Christine Lemke retweeted
Today, #paperclip is even faster and more reliable. We introduce Paperclip Repos, a git-like layer on our virtual filesystem that makes literature synthesis reproducible + verifiable. This enables better grounding and large-scale scientific analysis gxl.ai/blog/paper-repos
Big Update🤩: #paperclip now includes full papers from all of arXiv, PubMed Central and 150 million abstracts!🖇️ You can give your LLM all that knowledge in one line—all optimally indexed for AI agents. Much more thorough and ~100x faster than web search, and free.
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