Working to improve findability, accessibility, and interoperability of NIH Common Fund data sets and to encourage data reuse
Joined October 2019
- Tweets218
- Following34
- Followers218
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Common Fund Data Ecosystem retweeted
Video by the @adamcresnick team demonstrating an application describing cross-DCC analysis with GTEx data
#CFDE #GA4GH
youtube.com/watch?v=zMLXIP4T…
xitter.cf/SahaSurya/status/15787…
A practical manifest based solution for file transfer using the #GA4GH #DRS standard presented at the recent Plenary meeting. Feedback welcome!!
#SevenBridges #Cavatica #CFDE
figshare.com/articles/poster…
Common Fund Data Ecosystem retweeted
A practical manifest based solution for file transfer using the #GA4GH #DRS standard presented at the recent Plenary meeting. Feedback welcome!!
#SevenBridges #Cavatica #CFDE
figshare.com/articles/poster…
If you are interested in using LINCS datasets and tools, this is an excellent resource from @AviMaayan and colleagues currentprotocols.onlinelibra…
.@NIH_CommonFund’s Request for Information invites you to share what you think is the greatest opportunity in #biomedical and behavioral research today and why they should pursue it as a program. go.usa.gov/xSkzc
Common Fund Data Ecosystem retweeted
OUT NOW! @NAR_Open SigCom #LINCS academic.oup.com/nar/advance… @ maayanlab.cloud/sigcom-lincs portal by @BD2KLINCSDCIC @MaayanLab serving 1M expression signatures from @LINCSProgram @GTExPortal & @NCBI GEO. SigCom #LINCS has #gene #geneset #metadata #sig #search & #FAIRdata @NIH_CommonFund
This morning @raynamharris led a session of R for RNASeq Analysis with @GTExPortal data. Currently we're in a session on exploring data from @sparc_science! See website for info & recordings: nih-cfde.github.io/2022-may-… Register & zoom link here: bit.ly/3MkPJtH
Join us today at 9 am PT! @ctitusbrown will lead a session on exploring and analyzing data from the Human Microbiome Project (@hmpdacc) with #sourmash using Amazon Web Services. Register at bit.ly/3MkPJtH xitter.cf/ctitusbrown/status/152…
This morning's CFDE Hackathon session introduced the @CfdeNih, @hmpdacc, @kidsfirstDRC, @sparc_science & @GTExPortal. In the afternoon, @jessicalumian demoed the CFDE Search Portal. Recordings are available at: nih-cfde.github.io/2022-may-… Register to attend: bit.ly/3MkPJtH
The CFDE Hackathon starts Monday, May 9! Sessions will feature the @CfdeNih Search Portal and provide opportunities to explore data from @hmpdacc, @kidsfirstDRC, @sparc_science, and @GTExPortal! More info at: nih-cfde.github.io/2022-may-…… Register here: bit.ly/3MkPJtH
The newly updated CFDE Search Portal contains diverse data from 11 Common Fund Programs! Learn how to find and access data using the portal at the CFDE Hackathon on Monday, May 9! Visit our website for more info: nih-cfde.github.io/2022-may-… Register here: bit.ly/3MkPJtH
We're excited to announce a feature and data update to the CFDE Portal! Users can now create personal collections, export data, and search for diseases, genes, proteins, compounds, substances, and time series data! app.nih-cfde.org/ @NIH_CommonFund
The CFDE Portal now features a variety of data types from 11 groups: @4dn_dcic, @exRNA, @kidsfirstDRC, @GTExPortal, @glyco_pm, @_hubmap, @hmpdacc, @druggablegenome, @LINCSProgram, @sparc_science, @MetabolomicsWB. View the portal at: app.nih-cfde.org/ @NIH_CommonFund
The Human Microbiome Project (HMP) contains DNA sequencing data profiling many sites across the human body. The CFDE Hackathon will have a session working with HMP data on Amazon Web Services! For more details, visit: nih-cfde.github.io/2022-may-… Register here: bit.ly/3MkPJtH
The CFDE Hackathon session "Intro to R for RNA-Seq Analysis" on 5/11 will teach participants how to import, wrangle, harmonize & visualize RNA-seq data in RStudio, featuring data from the @GTExPortal. More details at: nih-cfde.github.io/2022-may-… Register here: bit.ly/3MkPJtH
The @sparc_science portal maps connections between nerve and organ systems for discovery and development. The CFDE Hackathon features a session on accessing these resources with the SPARC API on May 11! More info at nih-cfde.github.io/2022-may-… Register here: bit.ly/3MkPJtH
The April CFDE Hackathon will feature a demo of the CFDE Portal, which contains data from over 10 different Common Fund groups! You will learn to find & access data on the portal. See our website for a full schedule: nih-cfde.github.io/2022-may-… Register here: bit.ly/3MkPJtH
The Common Fund Data Ecosystem is hosting a Virtual Hackathon from May 9-13th! This event will have sessions from @kidsfirstDRC, @sparc_science and @CfdeNih. See our website for more information: nih-cfde.github.io/2022-may-… Register here: bit.ly/3MkPJtH
In this workshop, attendees will learn common R tools for wrangling, harmonizing & visualizing RNA-Seq data. Taught by @raynamharris with data from the Gene Expression Tissue Project (GTEx). For more info and to register, visit bit.ly/3xGsYfX. #WednesdayWorkshops
Common Fund Data Ecosystem retweeted
If you're attending #AACR2022, we hope you visit @KidsFirstDRC at exhibitor booth No.3534! Attendees can get live Data Resource Portal demos, meet w/ #KidsFirst investigators/experts, and learn about how to access data for your research.
buff.ly/3u5kZ9Q
@NIH_CommonFund
Common Fund Data Ecosystem retweeted
Are you at #ExpBio and interested in open science #neuromodulation data, #modeling, and #mapping? Stop by Booths #1141 & #1140 in the Exhibit Hall to learn more about #NIH_SPARC and try out our #hands-on demos yourself! @sparc_science #sparcAtExpBio @expbio
ALT Images contains text: See hands-on Tools & Tech demos at ExpBio today. Contains the SPARC program's graphic identity.