Postdoctoral Fellow, Genome Biology, EMBL. Network Complexity | Comparative Systems Biology | Gut Bacteria

México
Joined March 2021
Juan Escorcia retweeted
#EMBOMicroCom Day 3️⃣🙌🏼 We have a busy programme both in Heidelberg and in Bangalore and here's a quick look inside the EMBL training labs! Everyone staying super focused during the image analysis session, working on the images from the plating experiment 🧫
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Juan Escorcia retweeted
Are you a PhD/postdoc fellow seeking to gain experience & access the technology platforms & research labs at EMBL? Apply for the EMBL Corporate Partnership Programme’s Visitor Fellowship to stay up to 6 months at one of the EMBL sites. Deadline: 31 March embl.org/jobs/position/HD025…
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Juan Escorcia retweeted
Bacterias: mucho más que cocos y bacilos 😉
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Aquí nuestra colaboración de esta semana para la @UniondeMorelos 📖 Mil tonos espléndidos. Las variaciones en el tono de piel en la especie humana ✍️ Dr. David Romero Camarena 🤓Para leer👇 bit.ly/3UM6Koq #Morelos #ACMor #LecturaRecomendada
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Juan Escorcia retweeted
¡Últimos días de registro! No te quedes sin participar en nuestro segundo Día de Puertas Abiertas
¿Ya te anotaste? El @ccg_unam está por cerrar el registro de visitantes para su día de Puertas Abiertas 🙌 Recuerda: jueves 15 de febrero podrás conocer sus instalaciones y las investigaciones que realizan 🔬⚗️🧬 Abierto a todo público puertas.ccg.unam.mx/2023/ini…
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Juan Escorcia retweeted
How reading the literature on a new topic feels
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Juan Escorcia retweeted
Isolating interactions from co-occurrences rdcu.be/dsier Co-occurrences can be proxies for interactions, but not all co-occurring species interact. A new study shows that super-generalist consumers realize more of their potential interactions in bipartite networks.
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Adaptive radiations in natural populations of prokaryotes: innovation is key -in @FEMSmicro Microbiol Ecology by Michiel Vos @padpadpadpad @Quince_Group (@EarlhamInst) and @rvosa (@Naturalis_Sci and @LeidenBiology) academic.oup.com/femsec/adva…
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Juan Escorcia retweeted
Interested in LLMs for genomic research but don't know where to start? looking for a review/survey to get started in this field? 👇👇😀 I am very excited to share that our review paper titled "To Transformers and Beyond: Large Language Models for the Genome" is now available as a preprint (arxiv.org/abs/2311.07621)! Our review unveils a revolution in genomics analysis with Genome LLMs. 🧬 🔍 What's Inside: ✅ The power & challenges of transformers in genomics. ✅ Cutting-edge models like HeynaDNA and scGPT & their impact. ✅ Deep dives into Enformer, DNABERT, and other Genome LLMs. 🌍 Why it Matters: 1. GPT-4's influence reshapes AI in genomics. Unmatched insights into transformers' role in genomics. 2. Critical analysis of new models, addressing interpretability, privacy, & computational needs. 3. Essential for computational biologists & computer scientists to navigate the future of genomic data analysis. This is a work led by the amazing PhD student, Mica Consens, in the lab! Also, a huge collaborative work with lots of field leaders @fabian_theis @genophoria @MKarimzade @michaelwainberg and Alan Moses! @UofT @VectorInst @UofTCompSci @UofT_LMP @UHN @pmcc_ai @UHNAIHUB
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Juan Escorcia retweeted
🚀 Exciting news from the OMA team! Our 2024 update brings a host of improvements to our orthology knowledgebase. Stay tuned for a series of highlights! #OMAUpdate2024 #Genomics #Bioinformatics academic.oup.com/nar/advance…
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Juan Escorcia retweeted
pix2tex is a #Python library that allows you to convert images of equations into LaTeX code. This allows you to incorporate an equation from a document into another document without recreating the equation from scratch. github.com/lukas-blecher/LaT…
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Juan Escorcia retweeted
Writing is an absolutely critical skill… and one that can be improved dramatically. Doing so requires not just repetitions, but deliberate efforts to improve. Some tips here: docs.google.com/document/d/1…
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Juan Escorcia retweeted
Can a "theory of everything" explain complexity from atoms and molecules to societies? The answer is negative, and even within physics, emergent, irreducible phenomena exist. Check this paper by @sfiscience co-founder David Pines and RB Laughlin pnas.org/doi/abs/10.1073/pna…
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Juan Escorcia retweeted
Am watching @PyTorch conference keynote and thought to give the torch.compile decorator for NumPy a try. Whoa, in a quick benchmark on my MacBook, I indeed got a ~35x speedup when compiling NumPy code with PyTorch. Exciting times. (Think of the ramifications for scikit-learn).
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Most important plots in Data Science Credits: blog.dailydoseofds.com/p/11-…
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Juan Escorcia retweeted
Hoy se publica en la revista @Nature un artículo sobre la diversidad genómica encontrada en el Biobanco Mexicano. Nuestra investigadora, la Dra. @mashaals y su grupo de trabajo son colaboradoras de esta investigación. ¡Felicidades! nature.com/articles/s41586-0…
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🚨New Section Online: Evolutionary Systems Biology🌱 Led by Prof. Ruriko Yoshida of @NPS_Monterey & Prof. Daniel Pinero of @UNAM_MX, it will focus on the applications of systems biology from an evolutionary and transdisciplinary perspective. Check it out and submit now ⬇

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What is not to love about distance metrics?
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