@_NetPyNE_

I enjoy building, optimizing, simulating and analyzing multiscale brain circuit models

netpyne.org
Joined March 2020
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  • Followers149
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Join us for the next NetPyNE bimonthly online meeting on Thursday April 18 at 3 - 4 pm ET! More info here: github.com/suny-downstate-me…
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Join us for the next NetPyNE bimonthly online meeting tomorrow Thursday Feb 15 at 3-4pm ET! More info: github.com/suny-downstate-me…
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NetPyNE v1.0.6 is now available. For a complete list of changes and bug fixes see: github.com/suny-downstate-me… See here for instructions to install or update to the latest version: netpyne.org/documentation/in…

Release v1.0.6 · suny-downstate-medical-center/netpyne

Version 1.0.6 New features Raster plot colored by phase Examples based on the CA3 model using the 'colorbyPhase' option in the plotRaster API for loading .mod files selectively Abil...

github.com
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Join us for the next NetPyNE bimonthly online meeting tomorrow on Thursday Dec 21 at 3 - 4 pm ET! More info here: github.com/suny-downstate-me…
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NetPyNE retweeted
INCF@INCForg15 Dec 2023
📢Call for community review📢 Help us assess @_NetPyNE_ 's value as a community standard! NetPyNE is an open-source Python package designed for the development, simulation, & analysis of biological neuronal networks 🧠 1/2
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Join us for the next NetPyNE bimonthly online meeting on Thursday Oct 19 at 3-4 pm ET! More info here: github.com/suny-downstate-me…

October 2023

A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON. - suny-downstate-medical-center/netpyne

github.com
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A detailed model of #primarymotorcortex that integrates experimental data across scales has been proposed! #phenomics Check out the latest article in @CellReports cell.com/cell-reports/fullte…
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Whether you are an experienced NetPyNE user or a newcomer, we encourage you to attend this meeting to connect with other members of the community and discover more about this rapidly evolving tool. We look forward to seeing you there!
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Information about the meetings will be posted on the NetPyNE Wiki: github.com/suny-downstate-me…, and the meeting slides: docs.google.com/presentation… -- feel free to add any content.

June 2023

A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON. - suny-downstate-medical-center/netpyne

github.com
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- Learn about the latest features in NetPyNE and request new features - Discuss your own model and learn about other new models - Share your issues/problems and learn how to fix them - Hear about past and upcoming courses and workshops - Become a NetPyNE contributor
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Hi all, We would like to invite you to the next NetPyNE bimonthly online meeting on Thursday June 15 at 3 - 4pm ET via Zoom: zoom.us/my/salvadordb. At the meeting you will be able to: ...
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NetPyNE v1.0.4 is now available. For a complete list of changes and bug fixes see: github.com/Neurosim-lab/netp… See here for instructions to install or update to the latest version: netpyne.org/install.html

Release v1.0.4 · suny-downstate-medical-center/netpyne

Version 1.0.4 New features Added 'linewidth' as argument of plotting.plotSpikeHist() More detailed validation of netParams Save and load model in native NetPyNE format Converted mos...

github.com
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Great catching up with friends and partners at #NeuroDataShare2023, hosted by @SWC_Neuro in London this week. Two days of inspiring presentations, panels, and exchanges bringing together modellers, experimentalists, computer scientists and funding agencies. #neuroscience #data
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Whether you are an experienced NetPyNE user or a newcomer, we encourage you to attend this meeting to connect with other members of the community and discover more about this rapidly evolving tool. We look forward to seeing you there! More info: github.com/suny-downstate-me… (3/3)

Home

A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON. - suny-downstate-medical-center/netpyne

github.com
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At the meeting you will be able to: - Learn about the latest features in NetPyNE and request new features - Discuss your own model and learn about other new models - Share your issues/problems and learn how to fix them - Hear about past and upcoming courses and workshops (2/3)
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Join us for the upcoming NetPyNE bimonthly online meeting, this Thursday February 16 at 3 - 4pm ET via Zoom: zoom.us/my/salvadordb (1/3)
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NetPyNE v1.0.3 is now available. For a complete list of changes and bug fixes see: github.com/Neurosim-lab/netp… See here for instructions to install or update to the latest version: netpyne.org/install.html
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We're very excited to share that a new co-simulation interface between @_NetPyNE_ and @thevirtualbrain which will allow researchers to study complex multiscale interactions involved in brain diseases will be available on EBRAINS early next year! bit.ly/3F6P3In
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New paper out! A reconstructed barrel cortical network: doi.org/10.1007/s12021-022-0…, work done by Chao Huang, Tansu Celikel and me. And a big thanks from @SDuraBernal and Eugenio Urdapilleta of the Dura-Bernal Lab, SUNY Downstate and @tarelli from @MetaCell for the @_NetPyNE_ help!
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We incorporate ScZ-associated genetic variants into a biophysically detailed network model of A1 (implemented in @_NetPyNE_) using an approach developed by @TuomoMM and used in previous work (sciencedirect.com/science/ar… ; academic.oup.com/cercor/arti…)
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