Thomas Stjernegaard Jeppesen retweeted
📢 Exciting news! Our collaborative work on "Aligning Standards Communities for Omics Biodiversity Data: Sustainable #DarwinCore-#MIxS Interoperability" is now published! 🌿🧬
👉 tinyurl.com/4puk97jj
🙌Closer to bridging the gap between #biodiversity #omics data standards!
🆕Methods paper - part of the @Bicikl_H2020 collection - reports on building sustainable #interoperability between @tdwg's Darwin Core and MIxS.
Find more: blog.pensoft.net/2023/10/04/…
#GEOBONconf2023 #TDWG2023
Thomas Stjernegaard Jeppesen retweeted
Introducing guidelines for publishing DNA-derived occurrence data through biodiversity data platforms: mbmg.pensoft.net/article/849…
Thomas Stjernegaard Jeppesen retweeted
Every time I help someone get their data shared to GBIF / OBIS I discover things in their data that they had no idea about. Things that would have gone undetected. This is an under appreciated part of sharing the data- the data provider gets better data.
Thomas Stjernegaard Jeppesen retweeted
FFS, det hedder ikke "giver @LeaWermelin tørt på". Det hedder illustrerer sin uvidenhed. "Rådyr, harer, fasaner"..... jeg bliver så træt. Vil I høre, hvad der er op & ned på biodiversitet, så følg med herunder. [1/15] effektivtlandbrug.landbrugne… #dkgreen #dknatur #dkpol
Thomas Stjernegaard Jeppesen retweeted
New guide and DwC extension: Publishing DNA-derived data through biodiversity data platforms doi.org/10.35035/doc-vf1a-nr…
Thanks to all contributing experts! 🇸🇪🇳🇴🇩🇰🇪🇪🇦🇺
ALT Velvet shank (Flammulina velutipes) by Oleg Ryzhkov - https://www.gbif.org/occurrence/2550027893 (CC BY-NC 4.0)
Thomas Stjernegaard Jeppesen retweeted
Also, I recently saw this manuscript from Srivathsan (@asrivath) et al (incl @RudolfMeier15) that allows folks to easily generate their own barcodes: biorxiv.org/content/10.1101/… They've been doing great work running 1000s of samples on flow cells, but whole genomes! That's news to me
Thomas Stjernegaard Jeppesen retweeted
Communicating taxa as digital datasets: introducing the taxon hypothesis (TH) paradigm: doi.org/10.3390/microorganis…
Thomas Stjernegaard Jeppesen retweeted
ONE WEEK TO GO in a lively community-review process for our new guide, Publishing sequence-derived data through biodiversity data platforms. Add your comments to @github by next Tuesday, 22 Sept.
Background:
gbif.org/news/6kuraQiAPdqeF5…
Document:
doi.org/10.35035/doc-vf1a-nr…
ALT Chocolate chip lichen (Solorina crocea). Photo 2020 Ricarda Pätsch via iNaturalist Research-grade Observations, licensed under CC BY-NC-SA 4.0.
Thomas Stjernegaard Jeppesen retweeted
NEW RELEASE in our series of technical documents for community peer review. We welcome community input and feedback on the guide, Publishing sequence-derived data through biodiversity data platforms, from now to 22 Sept 2020:
gbif.org/news/6kuraQiAPdqeF5…
ALT Chocolate chip lichen (Solorina crocea). Photo 2020 Ricarda Pätsch via @iNaturalist.org Research-grade Observations, licensed under CC BY-NC-SA 4.0.
Thomas Stjernegaard Jeppesen retweeted
New data-clustering feature aims to improve data quality and reveal cross-dataset connections: initial release of machine-learning algorithm identifies potentially related records, pointing toward wider integration of data gbif.org/news/4U1dz8LygQvqIy…
ALT Cortinarius vesterholtii observed in Højbjerg, Denmark by Thomas Stjernegaard Jeppesen. Photo via the Danish Mycological Society (used with permission).
Thomas Stjernegaard Jeppesen retweeted
Check out a new machine vision module for fungal species identification! tfhub.dev/bohemian-visual-re…
Just published on @TensorFlow Hub by team @LukasPicek, @MilanSulc01 et al. that won the FGVCx Fungi Challenge, in collaboration with #SvampeAtlas. See the field test:
#TFHub has a new great collection of ML Kit compatible models! To make it easier for mobile app devs to use these models, we’ve also added interactive visualizers powered by #TFJS and performance benchmarks on selected models.
Check it out here → goo.gle/2BXVXkj
Thomas Stjernegaard Jeppesen retweeted
#TFHub has a new great collection of ML Kit compatible models! To make it easier for mobile app devs to use these models, we’ve also added interactive visualizers powered by #TFJS and performance benchmarks on selected models.
Check it out here → goo.gle/2BXVXkj
Thomas Stjernegaard Jeppesen retweeted
I’m NERVOUS again- about young adults. Korea’s pop wide #COVID19 tests have revealed something scary: YOUNG PEOPLE are leading carriers. (Italy only tests the rather sick, biases to old people). If the socially active age20-29 truly carry 30% of all cases— that means trouble! 😨
Thomas Stjernegaard Jeppesen retweeted
We are proud to announce that the FGVCx #Fungi image embedding model is now live on TensorFlow Hub using training images of >1,000 species from 🇩🇰🍄 #SvampeAtlas #TFHub #GBIF tfhub.dev/google/svampeatlas…
Thomas Stjernegaard Jeppesen retweeted
Our paper on how #citizenscience contributed to #fungi #biodiversity knowledge in Denmark is out: sciencedirect.com/science/ar…
Thomas Stjernegaard Jeppesen retweeted
UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications academic.oup.com/nar/advance…
