@ShabazLab

Focus on developing proteomics technologies so mostly relates to sample prep, MS and LC.

 Oxford, England
chem.ox.ac.uk/people/shabaz-mohammed#/
Joined July 2020
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  • Followers439
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Shabaz Lab retweeted
Cell Reports@CellReportsApr 2
RNA binding as an emerging regulatory dimension in the type I IFN response dlvr.it/TRr3sF

RNA binding as an emerging regulatory dimension in the type I IFN response

Iselin et al. explore how the type I IFN response regulates RNA-binding activity using RNA-interactome capture and extend the RIC protocol to assess the role of phosphorylation in this process....

cell.com
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(JASMS) [ASAP] Investigating the Efficiency of Ultraviolet Photodissociation in Peptides Modified with N-Terminal UV-Absorbing Chromophores dlvr.it/TRjzlg (RSS) #MassSpecRSS #JASMS
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Prosit-MultiFrag, a model predicting spectra for UVPD, ECD, ETciD & EID, is out 🚀 🔗 nature.com/articles/s41592-0… Great collaboration with Shabaz Mohammed & Nikita Levin. Try it via Koina koina.proteomicsdb.org and Oktoberfest: github.com/wilhelm-lab/oktob… #Proteomics #MassSpectrometry

Integration of alternative fragmentation techniques into standard LC-MS workflows using a single...

Nature Methods - An integrated mass spectrometry platform enabling automated collision-, electron- and photon-based fragmentation techniques is presented. A deep learning-based model trained to...

nature.com
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A mass spectrometry platform integrates alternative fragmentation techniques into standard LC-MS workflows for broader community adoption. nature.com/articles/s41592-0…
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🔬 New research from Oxford Chemistry advances proteomics by combining multiple fragmentation strategies within a single mass spectrometry platform. Read more: chem.ox.ac.uk/article/combin…

Combining fragmentation strategies for next-generation proteomics

chem.ox.ac.uk
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Proud to announce my first publication is out in @PLOSPathogens ! Huge thanks to my co-first author Wael, @brennanlab, and @castello_lab. The paper explores how tick RNA-binding proteins respond to UUKV infection, you can find the paper here dx.plos.org/10.1371/journal.…
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🚨 New paper in @PLOSPathogens! 🚨 Together with @brennanlab, we mapped – for the first time – how tick RNA-binding proteins rewire during virus infection. 283 proteins changed activity, revealing key players in viral fitness. Read here: doi.org/10.1371/journal.ppat…

Uukuniemi virus infection causes a pervasive remodelling of the RNA-binding proteome in tick cells

Author summary In host cells, RNA-binding proteins play essential roles in the life cycle of many viruses by influencing how viral RNA is processed, translated, replicated and assembled into virions....

journals.plos.org
Alexandra Wilson@Wilsonasaur13 Aug 2025
Proud to announce my first publication is out in @PLOSPathogens ! Huge thanks to my co-first author Wael, @brennanlab, and @castello_lab. The paper explores how tick RNA-binding proteins respond to UUKV infection, you can find the paper here dx.plos.org/10.1371/journal.…
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🚨🚨News: Interested in the proteome configuration that makes a cell permissive or hostile to virus infection? Why mRNA levels do not fully reflect the proteome status after interferon treatment? See the new paper from @castello_lab and Mohammed lab mcponline.org/article/S1535-…
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We are excited to share our new Nature Methods paper describing the Chip-Tip workflow for single-cell proteomics identifying >5,000 proteins in single cells, enabling PTM analysis without enrichment and throughput of up to 120 single cell samples per day: rdcu.be/d6qJe
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🦸 Hidden superheroes in our cells!? New research led by @WaelSKamel, @castello_lab & @RosFrankInst, has uncovered how a team of cellular “superheroes” leap into action to stop viruses in their tracks. Find out more: gla.ac.uk/research/az/cvr/en… The study: cell.com/molecular-cell/full…

New research finds the ‘Clark Kent’ of cells, secretly fighting to protect us from viruses

From hard-working newspaper reporter to world-saving superhero, Clark Kent makes the transition to Superman in just a few seconds. Now, scientists have discovered that human cells are home to their...

gla.ac.uk
UofG MVLS@UofGMVLS12 Dec 2024
🆕 New research finds the ‘Clark Kent’ of cells, secretly fighting to protect us from viruses. In the study, scientists have discovered that human cells are home to their own hidden superheroes, covertly helping us to fight off a range of viruses. More➡️ gla.ac/3ZOFIP2
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Very proud of Innes Jarmson, who had the thesis viva yesterday! Congratulations, it has been a pleasure to supervise you. We wish you all the best for the future 🏆🍾🥂🥂🎉🎉🎉
Castello Lab@castello_lab4 Dec 2024
Delighted to share Inner Jarmson successfully defended his PhD thesis on identification of #RNA editing #enzymes involved in #virus infection. He did an amazing job defending his work in viva. Congratulations to Innes for his dedication and hard work! We are very proud of you!
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New publication from @castello_lab and @FranklinSystems in @MolecularCell 🚨🚨🚨! We discover a group of nuclear #RBPs that travel to the cytoplasm to inhibit #virus #infection. We discover a novel #RNA mediated antiviral mechanism mediated by the U2snRNP cell.com/molecular-cell/full…
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It is finally OUT!! After a pandemic, lab moving across the country!, 1+ under review and >120 panels later. 🧵 cell.com/molecular-cell/full…
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Had a great time at #HUPO2024 presenting our recent work using phosphoproteomics to characterise cellular quiescence in glioblastoma @uclcancer
Alejandro Brenes@AJ_Brenes23 Oct 2024
Great talk from @EmilyGaizley where she describes her new low cell number phospho proteomic workflow and how she used it to discover and follow up novel targets in quiescent glioblastoma cells. #hupo2024
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Thrilled to share our Multiplexed phosphoproteomics of low cell numbers using SPARCE biorxiv.org/content/10.1101/… Come see @EmilyGaizley @uclcancer present SPARCE to study rare quiescent cancer cells on Weds 23rd OP-80 at 15:25 Proteomics in cell biology session #HUPO2024
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MaxQuant just hit 15,000 citations! Our most-cited paper by far, thanks to the pioneering work of Juergen Cox and the amazing community of scientists who continue to push the boundaries of proteomics! #ScienceImpact #MaxQuant #proteomics nature.com/articles/nbt.1511
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Not only do our universities contribute financially to the economy, they also train our public sector workers, creating a better society and future for us all. See the full impact of higher education, teaching, research and innovation now👇 loom.ly/-J7obhI
data visualisation showing UK universities return on investment in numbers of midwives (3,210), social workers (9,675), counsellors (7,085), teachers (39,630), nurses (38,930), and doctors (16,970) qualified per year.

ALT data visualisation showing UK universities return on investment in numbers of midwives (3,210), social workers (9,675), counsellors (7,085), teachers (39,630), nurses (38,930), and doctors (16,970) qualified per year.

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Shabaz Lab retweeted
Ed Emmott@edemmott7 Sep 2024
Looking forward to welcoming everyone to Liverpool next summer!
British Society for Proteome Research@UKBspr7 Sep 2024
If like us, you're suffering from the post super meeting blues, well here is something to get excited about! We are announcing #BSPR25 which will be held from the 7th-9th of July in Liverpool! We are super excited about the next meeting and hope to see you all there!
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Delighted to have @kusterlab give the plenary lecture telling us about the TOPAS project #BMSSBSPR2024
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Congratulations to @WatersCorp very own Mike Morris for being awarded the @bmss_official BMSS Medal last night 🥳👏👏👏
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